| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0965 |
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| Symbol | |
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| ID | 8446557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1057600 |
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| End bp | 1059258 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 645040100 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_003200363 |
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| Protein GI | 258651207 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGT CCACGGCACT GGCCACCGTG CTGGTCGACG AACTGGTCGC CAGCGGCCTG
ACCGACGCGG TGCTCGCGCC CGGGTCGCGC AACGCCCCGC TGGCCCTGGC CCTGCATGCG
GCCGACGCGG CCGGCCGGCT CCGCCTGCAC GTGCGGATCG ACGAACGCAC CGCCGGCTTC
CTGGCCCTGG GGTTGGCCCG GGGCTCGGGG CGGCCCGTCG TGGTCGTCAC CACCTCGGGG
ACCGCGGTGG CCAACCTGCA TCCGGCGGTG CTGGAGGCGG CCCACGGCGG GGTGCCGCTG
ATCGTGCTGT CGGCCGACCG GCCGCCGTGG CTGCGCGATG TCGGGGCCAA CCAGACCGTC
GACCAGCGCG GCCTGTTCGG GCCCGCGCTG CGCTGGTTCC ACGAGTTCCC GGTGTCCCAG
CGGCGGTCCG GTCAGCAGGC CCACTGGCGG TCCATGATCG GCCGGGCCTG GGCCGCCGCG
AGCGGGGCCG CCGCAGTGCC CGGTCCGGTG CACCTGAACC TGCCGCTGGC CGAACCGCTG
CTGCCCGACG CCGATCCGGA CTGGCCCGAG CCATTGGTCG GCCGGGGCGG CCCCTGGACC
ACCGCGGTGG CCACGGCGGC GGCCGACGGT CCGGCGGTGC CCGCTCCGGA GCCGGGTGAA
CGCGTGCTGT TCCTGGCCGA CCTGACCCAC CCCTGGACGG CGCTGGTCGC CGACGCCGGG
CACCTGGTCG TCACCGAGGC CGGCGGCGCC GCCGGTCGGG CGGTGCTGGG CACCGGGATG
CACCTGCTGG CCGCCCCGGC GTTCCTGGAC CGGGCCCGGC CCGACCGGGT GATCGTGCTC
GGCCGGCCCA CCCTGTTCCG CTCGGTGCAG GCGCTGCTCG CCGACCCGCG GGTGACCGTC
GACGTCGTCG CGCACCCCGC CGGCTACGCC GACCCGGCCG GGCACGTGCG GGCCGTCGCG
CCGGGCCTGC CCGACCTGAC CGAGCAGCCC GACCAGCAAT GGGCGGCCCG CTGGCGCGAC
GCCGACGCGG CGGCCGGCAA GGCGGTCAGC GACGTGCTCG ACGGGTTGGA GCTGACCAGC
TCGACCCGGC TGGCCCGCGA GCTCGTCGGG TTGCTGGCCG ACCGCGCCAC GCTGGTCCTC
GGTTCCTCCC AGCCCCCGCG GGACGTCGCG CTGGCCACCC GGGCGCGGGG CGGGGTGCGG
GTCGTGGCCA ACCGGGGCGT GGCCGGAATC GACGGGACCG TCTCCACCGC GATCGGGGTG
GCGCTGGCCG CCGGCGCCGG TCCCACGGTG GCGCTGCTGG GCGACCTGAC CTTCCTGCAC
GACCTGACCG GCCTGGTCGT CGGGCCCGAC GAGCCCCGAC CGGACCTGAC GATCGTGGTC
AGCAACAACG ACGGCGGGGC GATCTTCGGC ACCCTGGAGT CCGGCCGGCC CGACCACGCC
GATGCCTTCG AGCGGGTGTT CGGCACCCCG CACGCGGTCG ACCTCGGCGC GGCGGTGACG
GCGCTGGGTC ACCGGCACAC CCAGGTCCGG ACCCGGGACG AGCTGGCCCG GGCCCTGGAC
AACCCGGGTG GCATCCGGGT CGTCGAGGTG CGGACCACCA GAACCGATCT GCCGCAGACG
TTGTCGCGGC TGAGCGAGGC GGTCCGGGCG GCGGTCTGA
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| Protein sequence | MNPSTALATV LVDELVASGL TDAVLAPGSR NAPLALALHA ADAAGRLRLH VRIDERTAGF
LALGLARGSG RPVVVVTTSG TAVANLHPAV LEAAHGGVPL IVLSADRPPW LRDVGANQTV
DQRGLFGPAL RWFHEFPVSQ RRSGQQAHWR SMIGRAWAAA SGAAAVPGPV HLNLPLAEPL
LPDADPDWPE PLVGRGGPWT TAVATAAADG PAVPAPEPGE RVLFLADLTH PWTALVADAG
HLVVTEAGGA AGRAVLGTGM HLLAAPAFLD RARPDRVIVL GRPTLFRSVQ ALLADPRVTV
DVVAHPAGYA DPAGHVRAVA PGLPDLTEQP DQQWAARWRD ADAAAGKAVS DVLDGLELTS
STRLARELVG LLADRATLVL GSSQPPRDVA LATRARGGVR VVANRGVAGI DGTVSTAIGV
ALAAGAGPTV ALLGDLTFLH DLTGLVVGPD EPRPDLTIVV SNNDGGAIFG TLESGRPDHA
DAFERVFGTP HAVDLGAAVT ALGHRHTQVR TRDELARALD NPGGIRVVEV RTTRTDLPQT
LSRLSEAVRA AV
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