Gene Namu_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0895 
Symbol 
ID8446487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp987918 
End bp988718 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content71% 
IMG OID645040032 
ProductABC-2 type transporter 
Protein accessionYP_003200295 
Protein GI258651139 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCCGGGACCG CACCGAGCCG ATGCTCGGCG ACGCCTGGAC CATCACCCGC 
CGGCAGTTCT GGCACTGGCG GGCGCAGCCG GGTGGCTTCA CCGTCGGGCT GCTGTTCCCG
GTGCTGGTCA CCCTGATGTT CGGCGCGCTG TTCGGTGGCG CGATCGCCGG GCCGGGCGAG
GACTACTACT CGTTCCTGAT GCCCGGCATC TTCGTCATGG CCATGCTGTT CGGGCTGGAG
ACGACGATGA CGGCGGTCAA CACCGACGCC AGCCGGGGTG TCACCGACCG CTTCCGGTCG
CTGCCGATCC ACCCCGCGGC GGTCGTGCTG GGCCGCTGCC TGGCCGACAT GATCTACACG
GTGCTGGGCC TGATCGTGCT GATGGCCGCC GGCCTGGCGC TGGGCTGGCG ATGGTCGGAC
GGGATGACCG GGGCCCTGAC CGCGGTCGCC CTGCTCCTGA TGCTGCGGTT CGCGCTGCTG
TGGGTGGGCA TCTTCGTGGG CCTGATCGCG CCCGGACCGG AAACGGTGGT AGCCGTGCAG
ATCCTGGTCT GGCCGATCAG CATGCTGTCC AACATCTTCG TCGACCCGGC CACCATGCCG
GGGTGGCTCG GCGCGCTCGC GTCCTGGAAC CCGTTGTCGG CCACCGCCAC CGCCACTCGC
GAGCTGTTCG GCAACCCGAC CTGGGCCTCG GCCAGCTGGG TCAACGAGCA CGCCCTGCTG
CTGTCGGTGA TCTGGCCGGT GGCGATCACC GCGGTCTTCG CGCCGTTGGC GGTGCGGGCG
TACCGGCGGC TGGGCGGCTG A
 
Protein sequence
MTTTRDRTEP MLGDAWTITR RQFWHWRAQP GGFTVGLLFP VLVTLMFGAL FGGAIAGPGE 
DYYSFLMPGI FVMAMLFGLE TTMTAVNTDA SRGVTDRFRS LPIHPAAVVL GRCLADMIYT
VLGLIVLMAA GLALGWRWSD GMTGALTAVA LLLMLRFALL WVGIFVGLIA PGPETVVAVQ
ILVWPISMLS NIFVDPATMP GWLGALASWN PLSATATATR ELFGNPTWAS ASWVNEHALL
LSVIWPVAIT AVFAPLAVRA YRRLGG