Gene Namu_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0893 
Symbol 
ID8446485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp985864 
End bp987276 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content72% 
IMG OID645040030 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_003200293 
Protein GI258651137 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG AGACCGCCAT GACCGAAACC CCCCGTCCGG GTCCGGCGCC CCGGGTCGTG 
TTCCGTGGCC CGTCCCCGGC CGCCCGTCGG TTCCTGGCCA CCGAAGCGGC CGGGTCGGTG
TTCCTGCTGA TCGGCACCGT GCTCGCCCTG GCCTGGGCCA ATTCGCCGTG GGCCGCCTCC
TACGCCGGCC TGTGGCACCT GCCGGTCGGT GTCGAGATCG GCCCGCTGGC CTTCCAGATG
AGCCTGCAGC ATTGGGTCAA CGACGCCGCG ATGGCGGTGT TCTTCTGCGT GATCGGGCTG
GAGATCACCC GGGAGATCGC GCAGGGCGAC CTGCGGGATC GCCGGACGGT GACGGTACCG
ACCCTCGGGG CCGTCGGTGG GCTGCTCGTG CCCATCGGCA TCTACCTGCT GTTCAACCCG
TCGGGGGAGG CGGCGCAGGG CTGGGGTGTG GTGATGTCCA CCGACACGGC GTTCGTGCTC
GGGGTGCTGG CCCTGTTCGG GCCGCGCTGC CCGGACCGGA TCCGGGTATT CCTGCTGACC
TTGGCCATCG CCGACGACAT CGGCGCGATC ACCCTGATGG CGGTCTTCTA TTCCGAGGAC
CCCTCGCTGC CGGCCCTGGG CGTGTCCGTG TTGCTGGTCG GCGCGCTGCT CGGGCTGCGC
TGGATCGGCG TCTGGCGGTT GTACCCGTAC GTGCTGGTCG GGATCGCGCT GTGGTTCGCC
GTCTACCAGT CCGGAGTGCA CGCGACGCTG GCCGGGGTGG CCATCGGGTT GATCATTCCG
GCGATGCCGC CCGCGCAGTC GGTCGTCGAC CGCAGCGCCG CCTACAACCG GGCTCTGCGG
GAATCGCCCA CGGCCGAACG GGTCCAGCTC GCAGTCCTCG CCGCCCAGGC GACGATCCCG
GCCAACGACC GGCTGGAGCG GGCCCTGCAC CCGTGGACGG CGTACCTGAT CGTCCCGGTG
TTCGCACTGG CCAACGCCGG GGTCGCGCTG GACGCCGACG CGCTCGGGTC GGCGTTGGGC
TCGTCGGTGA CCTGGGGAGT AGCGGTGGCC CTGGTCCTGG GCAACACCGT GGGCATCACC
GGGGCCGCCA TGCTCACGCT GCGGCTGGGA TGGGGGGTGC TGCCGGGCGG GGTGCGCTAC
TCGCACCTGC TGGCCGCGGC CATGCTGGCC GGCATCGGCT TCACCATCTC GCTGTTCATC
GCCGAGCTGG CCTTCACCGA TCCCGCCGTG ATGGAGCAGG CCAAGATCGG CATCCTGGCC
GGGTCGCTGG TGGCTGCAGT GCTCGGCTCG ACCACCATGC GGCTGCTGGG CAACCGGTTC
CCGATGTGCT CGCCCGGAGC CGGGGAGTCC ACCCTGGCGT TGCCGCCCCG GCCCTGGCGG
GCCCCGCAAC CGGTGCTGGC GCCGGGGCGT TGA
 
Protein sequence
MTEETAMTET PRPGPAPRVV FRGPSPAARR FLATEAAGSV FLLIGTVLAL AWANSPWAAS 
YAGLWHLPVG VEIGPLAFQM SLQHWVNDAA MAVFFCVIGL EITREIAQGD LRDRRTVTVP
TLGAVGGLLV PIGIYLLFNP SGEAAQGWGV VMSTDTAFVL GVLALFGPRC PDRIRVFLLT
LAIADDIGAI TLMAVFYSED PSLPALGVSV LLVGALLGLR WIGVWRLYPY VLVGIALWFA
VYQSGVHATL AGVAIGLIIP AMPPAQSVVD RSAAYNRALR ESPTAERVQL AVLAAQATIP
ANDRLERALH PWTAYLIVPV FALANAGVAL DADALGSALG SSVTWGVAVA LVLGNTVGIT
GAAMLTLRLG WGVLPGGVRY SHLLAAAMLA GIGFTISLFI AELAFTDPAV MEQAKIGILA
GSLVAAVLGS TTMRLLGNRF PMCSPGAGES TLALPPRPWR APQPVLAPGR