Gene Namu_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0882 
Symbol 
ID8446474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp973925 
End bp974758 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID645040019 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003200282 
Protein GI258651126 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.262564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAG GGCCCGGCCG GGGCGACGAT GCCGGGTGGC ACACCCGCAC TGCCAAGCAG 
CGGCAGCGGC AGCGGGAGAT CGCCGAACTC GTCGTCGCCG AGGGCACGGT GCGCATCGAG
GATCTGATCG AGCGGTTCGG CGTCAGCGCC ATGACCGTGC ACCGCGATCT GGATCAACTG
GAAAGCCAGG GGCTGCTGCG CAAGACCCGC GGTCAGGTGA CCGCGCTCAG CTCCAGCCTG
ACCGAGTCGG GCATGACGTT CCGGCAGACC CAGCACAACG CCGAGAAGGA TGCGCTCGCC
GTGGCCGCGC TGGAATTCAT CGAGCCCGGC CACAGCGTGT TCCTGGACGA CTCGACGACC
GGCCTGCACC TGGCCCGGCT CCTGCCGCAA CGGGCGCCGC TCGGCGTGAT CACCCACTCG
GCGGCGGTGG CCGCGGAACT CGCTCGGGAG CCACAGATCT CGCTGACCGT CGTCGGCGGC
CTGTATCACT CCTGGTGCGA CGCCTACCTC GGGCAAATGA CGGTGGACGC CATCCGGCGG
ATCCGGGCGG ACACCTTCGT GATGTCCACG GCCGCGATCA CCGACGACAT CTGCTTCTTC
CAGACCCAGG ACACCATCGC GGTCAAGCGG GCGATGTTCG ACTCGTCCGC CCAGCGGATC
CTGTACACCG ACCACACCAA ATTCGGTCAG CGGGCCTTGC ATGCGTTGCT CCCGCTGACC
GAATTCGACG TCGTCATCGT TGACGAACTG ACCCCGGACG TGCATGTGGA TCGGTTGCGC
CGCAAGGGGA TCGAGGTGGT GGTCGCGCCG GTGCCGGGAG CCGCCCAGGC CTAG
 
Protein sequence
MTAGPGRGDD AGWHTRTAKQ RQRQREIAEL VVAEGTVRIE DLIERFGVSA MTVHRDLDQL 
ESQGLLRKTR GQVTALSSSL TESGMTFRQT QHNAEKDALA VAALEFIEPG HSVFLDDSTT
GLHLARLLPQ RAPLGVITHS AAVAAELARE PQISLTVVGG LYHSWCDAYL GQMTVDAIRR
IRADTFVMST AAITDDICFF QTQDTIAVKR AMFDSSAQRI LYTDHTKFGQ RALHALLPLT
EFDVVIVDEL TPDVHVDRLR RKGIEVVVAP VPGAAQA