Gene Namu_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0855 
Symbol 
ID8446447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp942783 
End bp944297 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content67% 
IMG OID645039992 
Productlysyl-tRNA synthetase 
Protein accessionYP_003200255 
Protein GI258651099 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1190] Lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCAC CGACCCCCGT AGACGACGAA GACCTGCCGG AGCAGATGCG CGTCCGTCGC 
GAGAAGCGGC AGCGCCTGCT CGACCAGGGC GTCGAACCGT ATCCGGTGGA GGTGGCCCGC
ACCACGAGCC TGGCCGAGAT CCGGCGTCGC TTCCCCGACC TGCCCCCGGA CACCGACACC
GGGGAACTGG TCGGCGTCAC CGGTCGGGTC ATCTTCCTGC GCAATTCGGG CAAGTTGTGC
TTCGTCACCC TGCGCGAGGG TGGTGCCGGC GACACCGGCA GCGAATTGCA GATCATGGTG
TCCCTGGCCG GCGTGGGTGA AGAATCTCTC GCGGCATTCA AACGAGACGT CGATCTCGGT
GATCACCTGT TCGCGCACGG CCGGGTGATC ACCTCCCGGC GCGGCGAGCT GTCGGTGATG
GCCGATTCCT GGTCCATTGC CGCCAAGGCC CTGCGCCCCT TACCCGTCGC GCACAAGCCG
CTGTCGGAGG AAGCCCGGGT CCGGCAGCGT TACGTCGATT TGATCGTGCG GCCGCAGGCC
CGGCGGACGG TGGAGCTGCG GGCCGCGGTG AATCGCTCGC TGCGGGCGAC CCTGCACGAC
CGCGGTTTTC TCGAGGTCGA AACTCCGATG CTGCAGGTGC TGCACGGCGG GGCCGCGGCC
CGGCCGTTCT CCACCCACAT GAATGCGCTG GACATGCAGG TGTTCCTGCG GATTGCCCCT
GAGCTGTACC TCAAGCGGGC GGCGGTCGGC GGAATCGAGC GGGTCTTCGA GATCAACCGC
AACTTCCGCA ACGAGGGTGT GGATTCCTCC CATTCGCCGG AGTTCGCGAT GTTGGAGGCG
TACCAGGCGT ACTCGGATTA CAACGGCATC GCCGAGCTGA CCCGCACGCT GATCCAGAAT
GTCGCCATCG CGGTGCACGG CACGACCTCG GTGATCCACG CCGACGGGCA CGAATTCGAT
CTGGGCGGCG AGTGGCCGGC GATCACCCTG TACGGGTCGC TGTCCGAGGC GGCCGGCCGC
GAGATCACCG TGCGGACCCC GATGAGCGAA CTGATCGAGA TCGCCGAGAA GCACGGTGTG
CCGGTCGCTC CGCACTACGG TCCGGGCAAG CTGGCCGAGG AACTGTTCGA CGAGCTGGTG
GTCGACACCC TGGTCGCCCC CACCTTCGTC CGCGACTACC CGGTCGAGAC CTCGCCGCTG
ACCCGCGATC ACCGCAGTGA ACCGGGGTTG ACCGAAAAAT GGGATCTCTA CATCCGTGGC
ACCGAAATCG CCACCGGGTA CTCCGAACTG GTCGACCCGG TCATTCAGCG CCAGCGATTC
CAGGAACAGG CCCGGTTTGC CGGCCTGGGT GACGACGAGG CCATGGTCCT GGACGAGGAG
TTCCTGCGGG CGATGGAGTA TGCGATGCCA CCGTCCGGCG GCATGGGCAT GGGCATCGAC
CGGCTCATGA TGGCCCTCAC CGGTCTGGGG ATCCGGGAGA CCATCCTGTT CCCATTCGTG
CGCCCGGGAG AATGA
 
Protein sequence
MSSPTPVDDE DLPEQMRVRR EKRQRLLDQG VEPYPVEVAR TTSLAEIRRR FPDLPPDTDT 
GELVGVTGRV IFLRNSGKLC FVTLREGGAG DTGSELQIMV SLAGVGEESL AAFKRDVDLG
DHLFAHGRVI TSRRGELSVM ADSWSIAAKA LRPLPVAHKP LSEEARVRQR YVDLIVRPQA
RRTVELRAAV NRSLRATLHD RGFLEVETPM LQVLHGGAAA RPFSTHMNAL DMQVFLRIAP
ELYLKRAAVG GIERVFEINR NFRNEGVDSS HSPEFAMLEA YQAYSDYNGI AELTRTLIQN
VAIAVHGTTS VIHADGHEFD LGGEWPAITL YGSLSEAAGR EITVRTPMSE LIEIAEKHGV
PVAPHYGPGK LAEELFDELV VDTLVAPTFV RDYPVETSPL TRDHRSEPGL TEKWDLYIRG
TEIATGYSEL VDPVIQRQRF QEQARFAGLG DDEAMVLDEE FLRAMEYAMP PSGGMGMGID
RLMMALTGLG IRETILFPFV RPGE