Gene Namu_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0800 
Symbol 
ID8446392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp880064 
End bp882610 
Gene Length2547 bp 
Protein Length848 aa 
Translation table11 
GC content73% 
IMG OID645039938 
Productprotein of unknown function DUF214 
Protein accessionYP_003200201 
Protein GI258651045 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGG TCACCCTCAA AGGCCTGCTG GCCCACAAAC TCCGGCTCGG GATGAGCGCT 
TTCGCGATCA TTCTGGGGGT CGCGTTCGTC GCCGGCACGT TCGTCTTCAC CGACACCCTG
AACCGCAGCT TCACCGACCT GTTCCGGCAG ACCGCCCCCG ACGTCACCGT CCGGCCGGTG
CACACCGCGT CCGCCGCCGG CGGGGACGGC TTCACCGGGC CGGATTCGCG GACCGTGCCC
GCCGACCTGC TGGCCGGCCT GGCCGCGCGC CCCGGGGTGG CCCGGGTGGA CGGTCAGATC
ACCGACCAGA GCACGTTCAT CGTCGGCCGC GACGGCAAGG TCGTCGGCAG CGGCGGCGGC
GCCCCGGGGA TGGGCCTGAC CTTCACCGAC GGGCCGGCCG CCGACGGTTC GCCGATCGTC
ACCCTCACCG GCGGTCGGGC GCCGGCCGGC CCCGACGAGT TCGTGCTGGA CGACAAGGCC
GCCGCGGCCG CCGGGTACGC CGTCGGTGAC CAGATCACCC TGGTGACCGC CGGTCCCGAG
CCGACGGTGC GCGGAACCAT GGTCGGCACG GTGCGTTTCG GTCAGACCGG CAACACCATC
GGCGCCACCC TGGTGTTGAT GGACGCGGCC ACCGCGCAAC GGCTGTACCT GGGTGGGCAG
GACGCGTTCA CCGACATCGC CGTCACCGGC GACGGTTCGG TGTCCAACGC CGGCCTGCGG
GACGAGGTCG GTGCGGCGCT GCCGACCGGT TTCGAGGCGC TGGACGATGC GCAGATCGCC
GCCGAGAGCC AGAGCAGCCT GGAACAGGGC CTGTCCTTCA TCACCACGTT CCTGCTGGTG
TTCGCCGCCG TGGCCCTGGT CGTCGGGACC TTCCTCATCC TGAACACGTT TTCGATCATC
GTGGCTCAGC GGACCCGAGA ACTGGCCCTG CTGCGGGCGT TGGGCGCCTC GCGTCGGCAG
GTGACCCGCT CGGTCCTGAT CGAGGCGCTG GTCGTCGGCC TGGTCGGGTC GACCATCGGC
CTGGCCCTGG GCTTCGGCCT GGCCCTTGGC CTCAAGGCGC TGTTCGGCGC GATCGGTCTG
GACCTGTCCG GAGCCGGGCT GGTGTTCGCC TGGCGGACGG TCGCCGTCGC CTACGCGGTG
GGCGTGCTGA TCACCCTGCT GGCCGCCTAC CTGCCGGCCC GGCGGGCGGC GCAGGTCCCG
CCGGTCGCCG CGATGCGCGA CGACGTGGCC ATGCCCGAGT CGTCCATGCG CCGCCGGCTG
GTGGCCGGTG GAATGCTCAC CGCCGTCGGG GCCGGGCTGA TGGGGTGGTC GCTGGCCGCC
GACGGCGGGC TGACCGCGCT GGGCATCGGC GTGCTGGCCG TCTTCGTCGG GGTGGCCCTG
CTCGCCCCGG TGATCGGCCG GCCGATCGTC GGGCTGATCG CCGCACCGTT CCCGCGGCTG
TTCGGCCCGG TGGGCGTGCT GGCCCGGCAG AACGCCCGGC GCAACCCGCG CCGCACCGCG
GCCACCGCCT CCGCGTTGAT GATCGGGCTG GCCCTGGTCA GCGCGATGGC GGTGCTGGGT
CAGTCCACCA AGGCCAGCGT CGACGAGCTG ATCGGCTCGG ACCTGCGGGC CGACTACGTG
GTGTCCAACG CCATCGGCAT GCCGTTCTCC ACCGACATCG CCGGCCGGAT CGCGGCCGTG
CCGGGTGTGG CCGAGGTGGT GCCGGTGCGC TACGGCCAGG CCCGGATCGA CGGGCAGGAC
ACCTTCCTCA CCGGAACCGA GGTCGCCGGC TACGGCCGGA TGGTGACCCT GACCGTGCGC
GAGGGCAGCC TGGACGGCGG CGGGGTGGTG GTCGGCGCCG ACCGCGCGGC GCAGCGGGGC
TGGCACGTCG GCGACGTGCT GCCGTTGACG TTCGCCGACC GCACCATCGA CCTGCCGGTC
ACCGCTGTCG TGGAGCCCAG CCAGCTCGCC GGATCCACCA TCGTGCCGCT GGACGTGCTG
CAGCAGAGTG GGCAGAGCCC GGTCGACTCG ACGCTTTACG TCGCTCGGGC GCCGGGGTCC
GATGCGGCGG CCGTCACCGC GGCGATCGAC ACCTCCATCG CCGACCTGCC GACGATCACC
GCCAAGGACC AGGCCGCGTT CGCCGCCGAG CAGCGCGCCC CGGTCGATCA GATCCTGACC
ATCGTCTACG CGCTGCTCGG GCTGGCGGTC ATCATCGCCG TGCTGGGCAT CGTCAACACC
TTGGCGCTGT CGGTGATCGA GCGGACCCGC GAGGTCGGCC TGCTGCGCGC GGTCGGCCTG
AGCCGCCGCC AGCTGCGGTC GATGGTGCGG CTCGAGTCGG TGGCCATCGC GGTGCTCGGG
GCGGTGCTGG GCGTCGGCCT GGGGCTGGTG TTCGGGATCA GCCTGCGGCA GGCCCTGTCC
GGTGACGGGG TGTCGGTGCT GTCGGTTCCG GTCGGCCAGC TGGCCGTGTT CGTGCTGCTG
TCCGCGCTGG TCGGGGTGCT CGCCGCGGTC TGGCCGGCCC GCCGAGCGGC CCGGATGGAC
GTGCTGCGCG CCATCACCGC CGACTGA
 
Protein sequence
MLKVTLKGLL AHKLRLGMSA FAIILGVAFV AGTFVFTDTL NRSFTDLFRQ TAPDVTVRPV 
HTASAAGGDG FTGPDSRTVP ADLLAGLAAR PGVARVDGQI TDQSTFIVGR DGKVVGSGGG
APGMGLTFTD GPAADGSPIV TLTGGRAPAG PDEFVLDDKA AAAAGYAVGD QITLVTAGPE
PTVRGTMVGT VRFGQTGNTI GATLVLMDAA TAQRLYLGGQ DAFTDIAVTG DGSVSNAGLR
DEVGAALPTG FEALDDAQIA AESQSSLEQG LSFITTFLLV FAAVALVVGT FLILNTFSII
VAQRTRELAL LRALGASRRQ VTRSVLIEAL VVGLVGSTIG LALGFGLALG LKALFGAIGL
DLSGAGLVFA WRTVAVAYAV GVLITLLAAY LPARRAAQVP PVAAMRDDVA MPESSMRRRL
VAGGMLTAVG AGLMGWSLAA DGGLTALGIG VLAVFVGVAL LAPVIGRPIV GLIAAPFPRL
FGPVGVLARQ NARRNPRRTA ATASALMIGL ALVSAMAVLG QSTKASVDEL IGSDLRADYV
VSNAIGMPFS TDIAGRIAAV PGVAEVVPVR YGQARIDGQD TFLTGTEVAG YGRMVTLTVR
EGSLDGGGVV VGADRAAQRG WHVGDVLPLT FADRTIDLPV TAVVEPSQLA GSTIVPLDVL
QQSGQSPVDS TLYVARAPGS DAAAVTAAID TSIADLPTIT AKDQAAFAAE QRAPVDQILT
IVYALLGLAV IIAVLGIVNT LALSVIERTR EVGLLRAVGL SRRQLRSMVR LESVAIAVLG
AVLGVGLGLV FGISLRQALS GDGVSVLSVP VGQLAVFVLL SALVGVLAAV WPARRAARMD
VLRAITAD