Gene Namu_0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0758 
Symbol 
ID8446347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp834745 
End bp836901 
Gene Length2157 bp 
Protein Length718 aa 
Translation table11 
GC content71% 
IMG OID645039895 
ProductYhgE/Pip N-terminal domain protein 
Protein accessionYP_003200161 
Protein GI258651005 
COG category[S] Function unknown 
COG ID[COG1511] Predicted membrane protein 
TIGRFAM ID[TIGR03061] YhgE/Pip N-terminal domain
[TIGR03062] YhgE/Pip C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA CCGTCAAGCT CGCCGGCTAC GAATTCCGCC GGTTCAAGGG CCCCTGGCCG 
GTGATCGGTC TGCTGTTCGT GCTGCTCATC CCGACGGTTT ACGCCGGGCT GTACCTGTGG
TCGAACTGGG ATCCGTACGG CCGCCGCGAT CAGGTTCCGG TCGCCGTGGT CAACCTCGAC
GAGCCGGCCC AGGTGGAGAA CGCCACGATC AGCGCGGGCG ACCGGTTGGT CAGCGAACTG
GGCTCCGACC CGATCTTCGC CTGGCAGTTC GTCGGGCAGG ACCAGGCCGA GCAGGGCCTG
GCCGACGGCA CCTACTACAT GATCGTGGAG ATCCCGCCGG ACTTCTCGGC CAACCTGGTC
AGCGGATCCG GGGCCACCCC GGAGCGGGCC AACGTCAACC TGCGGCTCAA CGACGCCAAC
GGGTACCTGA CCCAGTTGCT GGTCGCCTCG GCCCAGCCGC AGCTGGAGGC GGCGATCGAC
CGGGCCGCGC TGGGTGCCTA TCTCGAGTCG GTCTTCGCCA ATCTGGACAC CATCCGCGAT
GGCGTTCGGG CCGCCGCGGG GTCGGCCGGC AAGCTGGCCG CCGACACCGG CACCGCGCTG
ACCAGCGCCA CCGATACGGC CAACGCCGTC ACCGCGGCCA AGCAGAGCTC GACCACGGTG
GTCGGCGACC TGGCCACGGC CAAGTCCTCC TCGTCGGCGC TGGTCACCTC GTCCGGCGAC
GCCAAGGCCA GTTCGGCGTC GGCGGTCACC GCGTTGGGCA GCGCCACCAG CGCGGCCTCC
ACCCTGTCCT CCTCGGCCGA CAGCGCGTCC TCCAGCGCCA GCTCGCTGGC CGGCAGCGTG
GGTCCCTCCA TCAGCGCGAT CGATGCGGCC GCCCCGGCGC TGGGTCAGTC GGCCGCCAAC
GTCGAGGCAG CCACTCAGGA CACGTCCTCG CTGGCGGCCC AGCAGACGCA GGACGTGGCC
TCGGTCAACA GCGTGATCGC CACCCTCAAA TCGCAGAACC CGGGCGTCAA CTGGTCCAGC
CTGGATGCGG CCATGGCCGA CCTGGGCACC AACACCGGGC TGCTCAACCA GTCGGCCGCC
CAGGCCTCGG CCCAGGCGGT GTCGGTGAAC TCGTCGGCCA CCACCGTCAC CAACGCCGCG
TACGGCCTGT CCGGGGCCGG CAGTGAGCTG ACCAACCTGG CGACCACCAC GGCCACCGTC
TCCACCGGCC TGTCCGGCCT GCTCGACAGC GTCTCGACGG CCGCCAACGC CGCCTCCGGG
GTGGACAGCG CGGTCAACGG CATCGCCGCG TCGGCCACCG ATCTGGACTC CTCGATCGGC
GCCGCCCAGC TGGCCGCGCA GAGCACCGAC GACAGCCTGA CCGTCGCCGA GACCAGCTCG
TCCACCCTGG TCAGCACGAT GACCGGGATC AACGGCGCGG CCTCCGAACT GGCCACCGGC
CTGAGCGACG CCGCCGATCG CATCCCGACG CTGGCCCCGG GCGAGCAGGC CCAGACCGAG
CAGGTGCTGT CCTCGCCGGC CGACATGACC GTGCTGGTCG ACAATCCGGC GGTCGTCTAC
GGGCGGGGCA TGGCGCCGAC CGCGTTCAGC TTCGCCATCT GGGTGTTCGC GCTGGCGGTG
TTCCTGCTGC TGCGGCCGAT CGCCGCGGGT GCGCTGCTGG CCCGCGCGTC GTCGCTGCGG
ATCGCGGTGG CCGGGTGGCT GCCACCGCTG GCGGTGGGCA TCGTCGGCTC GCTGCTGCTG
TTCGGCATCG TCTGGTTGGG CCTGCATCTG GACCCGGTCA ACGCCGGCGC CGCGGTGGGG
GTGATCGCGC TCGGCGTCGC CTGCTTCACC GCGCTCACCC ACCTGCTGCG GACCTGGTTG
GGCAAGATCG GCACGGCGAT CGCGCTGGTG CTGCTGATGG TGCAGTTCAC CGCGTCCGGC
GGGCTGTATC CGATGCCGAC CACACCCACC CCGTTCCAGG TGATCGAGAA GGCCATGCCG
ATGACCTACC TCATCGACGC GCTGCGGATC ACCTTCACCG GCGGGCTCTA CCAACGACTG
TGGATTGACC TGGGCGTGCT CGCCGGGATC ACCGTGGTCG CGGTGGGACT GACCGTGCTG
GTGGTGCACC GCCGGCGCAC GTTCCGGCTG ACCGACCTGC AGCCGATCCT GTCCTGA
 
Protein sequence
MIKTVKLAGY EFRRFKGPWP VIGLLFVLLI PTVYAGLYLW SNWDPYGRRD QVPVAVVNLD 
EPAQVENATI SAGDRLVSEL GSDPIFAWQF VGQDQAEQGL ADGTYYMIVE IPPDFSANLV
SGSGATPERA NVNLRLNDAN GYLTQLLVAS AQPQLEAAID RAALGAYLES VFANLDTIRD
GVRAAAGSAG KLAADTGTAL TSATDTANAV TAAKQSSTTV VGDLATAKSS SSALVTSSGD
AKASSASAVT ALGSATSAAS TLSSSADSAS SSASSLAGSV GPSISAIDAA APALGQSAAN
VEAATQDTSS LAAQQTQDVA SVNSVIATLK SQNPGVNWSS LDAAMADLGT NTGLLNQSAA
QASAQAVSVN SSATTVTNAA YGLSGAGSEL TNLATTTATV STGLSGLLDS VSTAANAASG
VDSAVNGIAA SATDLDSSIG AAQLAAQSTD DSLTVAETSS STLVSTMTGI NGAASELATG
LSDAADRIPT LAPGEQAQTE QVLSSPADMT VLVDNPAVVY GRGMAPTAFS FAIWVFALAV
FLLLRPIAAG ALLARASSLR IAVAGWLPPL AVGIVGSLLL FGIVWLGLHL DPVNAGAAVG
VIALGVACFT ALTHLLRTWL GKIGTAIALV LLMVQFTASG GLYPMPTTPT PFQVIEKAMP
MTYLIDALRI TFTGGLYQRL WIDLGVLAGI TVVAVGLTVL VVHRRRTFRL TDLQPILS