| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0752 |
|---|
| Symbol | |
|---|
| ID | 8446340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 827391 |
|---|
| End bp | 828191 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645039888 |
|---|
| Product | Extradiol ring-cleavage dioxygenase class III protein subunit B |
|---|
| Protein accession | YP_003200155 |
|---|
| Protein GI | 258650999 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.943488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CCGAACGCCC GGCCACTGAC CGGATGCCCG TGCTCTACCT GTCCCACGGC
GCCCCGCCTC TGGCCGACGA CGCGGTCTGG ACCGAGCAGC TGGCCGCGTG GAGCCGCGAC
ATCCCGCGGC CGACGTCGAT CCTGGTCGTC TCGGCGCACT GGGAGTCCGC CCCGCTGGCC
GTCGGGGCCA CCGAGACGGT GCCGCTGACC TACGACTTCT GGGGATTCCC GGAGCGCTAC
TACCAGGTGA CCTACGAGGC GCCGGGTGCA CCCGAGCTGG CCAAGGACGT CGCCGGCCTG
CTCACCCGGC CGGGCCAGCC GGTGCACCAG GACCCGAACC GCGGCCTGGA CCACGGCGCG
TACGTGCCGC TGGTGGAGAT GTACCCCGAC GCCGACATCC CGGTGCTGCA GGTCTCGATG
CCCACCCTGG ATCCGCGGGG CCTGTTCGAG GTCGGCCGCC AGCTGGCGCC GTTGCGCGAC
GACGGCGTGC TGATCATCGG CTCCGGCTTC ACCACCCACA ACCTGTCCCT GGCCGATTTC
GGGGACACCA CCGGCGCCGG CCCGGCCTGG GGCCAGGAGT TCGACGCCTG GGCCAAGGAG
GCGGTCGAGT CCGGCGACAT CGACGCCATC CTGGACTTCG AGCACCGCGC GCCGGCCGCG
CGTATCGCCC ACCCGCGCAC CGAACACTGG GCCCCGCTGT ACGTCTCGCT CGGCGCGACC
GCCGACGAAT CGCAGGACGC GACGAGCACT GTCGACGGCT TCTGGTACGG CCTGTCCAAG
CGGTCCTTCC AGCTGAGCTG A
|
|---|
| Protein sequence | MTTTERPATD RMPVLYLSHG APPLADDAVW TEQLAAWSRD IPRPTSILVV SAHWESAPLA
VGATETVPLT YDFWGFPERY YQVTYEAPGA PELAKDVAGL LTRPGQPVHQ DPNRGLDHGA
YVPLVEMYPD ADIPVLQVSM PTLDPRGLFE VGRQLAPLRD DGVLIIGSGF TTHNLSLADF
GDTTGAGPAW GQEFDAWAKE AVESGDIDAI LDFEHRAPAA RIAHPRTEHW APLYVSLGAT
ADESQDATST VDGFWYGLSK RSFQLS
|
|---|
| |