| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0729 |
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| Symbol | |
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| ID | 8446316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 800809 |
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| End bp | 801981 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 645039864 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003200132 |
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| Protein GI | 258650976 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCC ACCCGGTGCT GTCCGACGAG GTCATCGGGC GGGTCCAGCG CCGTCTGGTC
GACCGCGGCC AGTCGCCGGA TCCGCAGGCC CTGGCCCAGG CGCTGCGCGC GGAATCGTCG
ATGCTGATGA GCGACGCCGA GATGCTGGGC CTGATCAGGG AACTGCAGCG CGAGCTGGTC
GGGGCCGGAC CGCTGGCCGA CCTGCTGGCC GACCCGTCGA CCACCGACGT GGTGGTGAAC
TCGCCCACCG ACGTGCGGGT GGACCGGGGC GCGGGCTGGG AGCCCGCGCC GGTGCGGTTC
GCCGACGAGG CGGCCGTGCA GCGGCTGGCC CGACGCCTGG CCACCGCGGC CGGGCGCCGG
TTGGACGACG CGCACCCGCA CGTCGACGCG CGGCTCGCCG ACGGCACCCG CCTGCATGCC
GTGCTGGCGC CCGTCGCCGC GTCGGGCACC TGCCTGTCGC TGCGGGTGCT GCGGCCGGTC
CGGCACGATC TGGCCGCCCT GGTCGACGCC GGCAGCCTGC CCGGGGCGAC CCTGCCGGCC
GTGACGGCGA TGCTGCGAGC CCGGTTGGCG TTCCTGGTCT CCGGCGGGAC CGGTTCGGGC
AAGACCACTT TGCTGTCCGC GCTGCTGACC GCCGTGCCGG CGCACGAGCG GGTGGTCACC
GTCGAGGACG CCGAGGAGCT GCGCCCGCCG CACCCGCATG TGGTCCGGCT GGTCGCGCGC
CAGGCCAACG TCGAAGGGGC CGGGACGATC TCGATGCGCG ATCTGGTTCG GCAGGCCCTG
CGGATGCGGC CGGACCGGCT GGTCGTCGGC GAGGTCCGCG GGGCCGAGGT CGTCGACCTG
CTGGCGGCGA TGAACACCGG CCACGAGGGC GGCGCCGGCA CGGTGCACGC CAACACGGCC
GCCGACGTGC CGGCCCGGCT GGAGGCGTTG GCCGCGCTCG GCGGCATCGA GCGGGCCGCG
CTGCATTCCC AGCTGGCCGG CGCCGTGCGG GTGGTGCTGC ACGTGCGGCG CCGCGGCGCG
CAGCGCGAAT TGGCCGAGAT CGCCCTGCTG GGTAGGGGTT CGGACGGGTG GGTGTCGGCG
CAGCCGGCCG TGATCGCGGG CCGGCCGCAG GAACCGGGAG CCGCCCGGTT GGCGGCGCTG
CTCGCCGAGC GGGGCGAGCC GTGCCCGTGG TGA
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| Protein sequence | MITHPVLSDE VIGRVQRRLV DRGQSPDPQA LAQALRAESS MLMSDAEMLG LIRELQRELV
GAGPLADLLA DPSTTDVVVN SPTDVRVDRG AGWEPAPVRF ADEAAVQRLA RRLATAAGRR
LDDAHPHVDA RLADGTRLHA VLAPVAASGT CLSLRVLRPV RHDLAALVDA GSLPGATLPA
VTAMLRARLA FLVSGGTGSG KTTLLSALLT AVPAHERVVT VEDAEELRPP HPHVVRLVAR
QANVEGAGTI SMRDLVRQAL RMRPDRLVVG EVRGAEVVDL LAAMNTGHEG GAGTVHANTA
ADVPARLEAL AALGGIERAA LHSQLAGAVR VVLHVRRRGA QRELAEIALL GRGSDGWVSA
QPAVIAGRPQ EPGAARLAAL LAERGEPCPW
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