Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0665 |
Symbol | |
ID | 8446251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 733341 |
End bp | 734945 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645039800 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_003200069 |
Protein GI | 258650913 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCA CCAAGGGCAG CGGCGGCGCG CACGCCGGCG CGCAGTTCGA CCAGAACGAC GATTCGGTCG TCGTCGTCAT CGGCTCCGGA GCCGGTGGCG GCACGATGGT GCACGACCTG ACCAAGGCCG GCGTCAACGT CGTCTGTCTG GAGGCCGGGG CGTTCTTCTC CATCGACGAC TGGGTCAACA ACGAGTGGGA AGCGTTCGGC CAGATGGCCT GGCTGGACAT GCGCACCACG TCCGGATCGT GGCGGATGCC GCGGGACTTC CCGAACCTGC CGGCCTGGAT CGTCAAGGCC GTCGGCGGCA CCACCACCCA CTGGTCCGGC GCGACGCCGC GGTTCCACGA CCACGAGTGG AAGGCCCGCA CCTACTACGG CCGGATCGAC GGGGCCAACC TGCTCGACTG GCCGGTGACG GCCGACGAAA TGCGTTCCTA CTACTCGACC GCCGAGGATC GCATCGGCTC GACCCACACC AACGGCCGCG CCCCGCTGCC GGCCAACAAC AACTACTTCG TGCTGGCCAA CGGCGCCGAG AAGCTGGGCT ACCTGTACTA CGCCACCGGC CCGTACGGCA CCAACGCCGA GCCGTACGAC GGGCGACCCG CGTCGATCCA GGACGGCTTC AACTTCCAGG GCGACAAGAA CGGCTCCAAG TGGAGCACCC TGGTCAGCGA GATCCCCAAG GCGCTGGCCA CCGGCAAGCT GGATCTGCGG CCCAATTCGC ATGTCGTGCA GATCACCCAC GACGCCTCCG GCCGGGCCGA CTCGGTGCTC TACCTGGACG CCGATGGAAC CCTGCAGCGG CAGAAGGCCC GCGTCGTCTG CGTCGCCGGC AACTCGATCG AGACGCCGCG ACTGCTGCTG ATGTCGGCCA GCCCGCAGTT CCCGGACGGC CTGGCCAACT CCTCCGGGCA GCTGGGCCGC AACTACATGC GGCACACGAC CGGTTCGGTG TATGCCCAGT TCGACCGGCC GGTGCACATG TACCGGGGCG AGACGATGGC CGGCCTGATC GCCGACGAGT CCAGGCACGA CCCGGATCGC GGGTTCGCCG GCGGCTTCTA CATGGAGACC CTCTCGCTGG GGGTGCCGTT CCTGGCCAGC TTCGTCGAGC CGGGTCTGTG GGGTCCGGAA TTCACCTCGA TCATGGACAG CTACGCCAAC ACGGCCGGCA TGTGGATCGT CGGCGAGGAC ATGCCGCAGG AGACCAACCG GGTCACCCTC AACCACGCGG TCAAGGACCA GCACGGCCTG CCGGTGCCCA ACGTGCATTT CGACGACCAT CCGAACGACG TCGCCATGCG CAACTACGGC TACCAGCAGG GGCAGCTGCT CTACGAGTCG GTCGGCGCCC TGTCCTCGCA CCGCACCCCG CCGTATCCGG CGACCCACAA CCTGGGCACC GCGCGGATGT CGGAGCGGCC CGAGGACGGC GTCACCAACG CCTACGGTCG CGCCCACGAC GTGCCGAACC TGTTCATCTC CGACGGGTCG GTGTTCACCA CCGGCGCAGC GGCCAACCCG ACGCTGACCA TCGTCGCGCT GGCCATCCGG CAGGCCGAGC ACATCGTGCA ATCCCTCAAG GCCCAGGAGC TCTAA
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Protein sequence | MATTKGSGGA HAGAQFDQND DSVVVVIGSG AGGGTMVHDL TKAGVNVVCL EAGAFFSIDD WVNNEWEAFG QMAWLDMRTT SGSWRMPRDF PNLPAWIVKA VGGTTTHWSG ATPRFHDHEW KARTYYGRID GANLLDWPVT ADEMRSYYST AEDRIGSTHT NGRAPLPANN NYFVLANGAE KLGYLYYATG PYGTNAEPYD GRPASIQDGF NFQGDKNGSK WSTLVSEIPK ALATGKLDLR PNSHVVQITH DASGRADSVL YLDADGTLQR QKARVVCVAG NSIETPRLLL MSASPQFPDG LANSSGQLGR NYMRHTTGSV YAQFDRPVHM YRGETMAGLI ADESRHDPDR GFAGGFYMET LSLGVPFLAS FVEPGLWGPE FTSIMDSYAN TAGMWIVGED MPQETNRVTL NHAVKDQHGL PVPNVHFDDH PNDVAMRNYG YQQGQLLYES VGALSSHRTP PYPATHNLGT ARMSERPEDG VTNAYGRAHD VPNLFISDGS VFTTGAAANP TLTIVALAIR QAEHIVQSLK AQEL
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