Gene Namu_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0660 
Symbol 
ID8446246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp728203 
End bp729138 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content69% 
IMG OID645039795 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003200064 
Protein GI258650908 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCA CCTACCGCCG GGCGCGGGAG CAACGCATCG ACTCTCTGGT CACGAGCGAC 
GACAAGGGAC TGTCCCTGTG GGGATCGGCC TGGCAGCGGC TGCGCGTCTC GCCGCTGTTC
TGGGTCGGCG CGGTGATCGT CGGACTGTTC CTGCTGCTGG CCATCTTCGG CCCGCTGTTC
GCCCCGCACG ACCCGGGCGC GCAGGTGCTG ATCGGCCAGA CCTCCCGGGC CCGCAACCAG
ATCGCCCCGC CGCAGGACGG TTTCCCGCTC GGCGGGGACA CGCTGGGCCG GGACCTGTTC
TCCCGCATGC TCGTCGGCAG CCGGCAGACC CTGCTGGTCG GTGTGTTCGC GACCATGATC
GGGTTGATCG GCGGGCTCAT CCTGGGCATC ACCGCCGGCG CCTTCGGTGG CTGGGTGGAC
ACCGTGATCA TGCGCATCGT CGACGTCATG CTCTCGATTC CCAGCCTGCT GCTGGCCATC
TCGATCGCCG TGCTGTTCGC CAATCCCAGC CTGACCAGCG TGATCATCGC AGTGGCGGTG
GTGCAGATCC CGGTGTTCGC CCGGCTGCTG CGCGGGCAGA TGCTGGCCCA GCGCGAGTCC
GACCACGTGC TGGCCGCCCG GGCGCTGGGC GTCAAGCGCG GCGCGATCGT CTTCCGGCAC
ATGGTGCCCA ACTCGCTGTC CCCGGTGATC GTGCAGGCCA CCCTGGTCAT CGCCACCTCG
ATCATCGACG CGGCCGCGCT GTCGTTCCTG GGCCTGGGTT CGCAGAACGT GTCCGAATCC
GAATGGGGGC AAATGCTCGG CGAGGCGCAG AACGTCATCG ACTCGCATCC GGGGCTGGCG
TTCTGGCCGG CCATCGCCAT CATCGTGGTC TGCCTGGGCT TCACCCTGCT GGGCGAATCC
CTGCGCGAGG CCATCGATCC CAAGAGCCGG CGGTGA
 
Protein sequence
MVTTYRRARE QRIDSLVTSD DKGLSLWGSA WQRLRVSPLF WVGAVIVGLF LLLAIFGPLF 
APHDPGAQVL IGQTSRARNQ IAPPQDGFPL GGDTLGRDLF SRMLVGSRQT LLVGVFATMI
GLIGGLILGI TAGAFGGWVD TVIMRIVDVM LSIPSLLLAI SIAVLFANPS LTSVIIAVAV
VQIPVFARLL RGQMLAQRES DHVLAARALG VKRGAIVFRH MVPNSLSPVI VQATLVIATS
IIDAAALSFL GLGSQNVSES EWGQMLGEAQ NVIDSHPGLA FWPAIAIIVV CLGFTLLGES
LREAIDPKSR R