Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0648 |
Symbol | |
ID | 8446234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 712543 |
End bp | 713904 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 645039783 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_003200052 |
Protein GI | 258650896 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACCTGC CGCCGCTACC GATCGACCGG CGCCTGCCCC GATCCCTGGC CGGCCAACTG GCCGACGGGC TGCGGGCCGC CGCCATCGCC GGCGTGCTGC GCCCGGGCGA CCGCCTGCCG TCCACCCGGA GCCTGTCGGC CCAGCTCGAG CTGAGCCGCA CCGTCTGCGC CGCCGCCTAC GACCAGCTGC TGGCCGAGGG ATGGCTGGCC ACCCGACGGG GCAGCGGCAC GTTCGTGGTC GGCGTGCCGG CGCCGGGTGC CGTTATCCCA TCCGCGTCCC GGCCGGTGCC CGCCTCGCTC CCGGGGCCGA GAACCCCTCG GCCGGTGTTG TCACTGCGGG CCGGAGTGCC GTGCCTGGCG GTGCTGGACC GCGGGATGTG GCGCCGGGCC TGGCGCGACG CGGCGGACGC CCCGGTCGAG CGGGCGTCCG ATCCGGAAGG TCTGCCGCCG TTTCGCGCGG CGGTGGTCGA GCATCTGCTG CGGCACCGGG GCCTGCCCTG CGACCCGGAG TTGGTGCTGG CCACCGCGGG CAGCACCGCG ACCCTGGCCG AGATCGGTGC CGTGCTGCCG GCCGGCGTCC CGGTGGCCGT GGAGAACCCC GGGTACGCGG GCGGAGCGTC GGCCCTGCGC TCGGCCGGCC GTGAGCTGGT CGGGGTGCCG GTCGACGCCG ACGGGATCGT CGTCGACGCC ATCCCGGAGG GGGTGTCCGC GGTCATGGTC ACCCCCGCCC ACCAGTACCC GTTGGGCGCC CGGCTGTCCG CCGCGCGGCG GGTGGAACTG GTCGATCGGG CCCGCCGGGA CGGCCTGCTG ATCGTCGAGG ACGACTACGA CGGGGAACTG CGTTACGACG TGGCCCCGCT GCCGCTGCTG GCCGCACTCG GGCCGGACGT GGTCGTGCAC CTGGGCACGG TGTCCAAGAT GCTGACCCCG GGACTGGGCT GCGGCTGGCT GGTCGCGCCG CCGGCGGTGC GGGCCGAGCT GGTCCGCCGG CGAGCCGCCA CCGGTACCCG CCCCTCCGCC GCCGGCCAAC GGGTCGTCAC CGCGCTAGCC GCCCACGGCG ACCTGGCCCG GCACCTGCGC CGGTTGCGCC GGGAGCTGGC CCGGCGGCGC GCCGAGGTGG TCGCGGTGGT GCGCGGCACC GGCCGGCTGG CGATGGGCGA TGCGGCCGGC GCGCACGTGG TGGTCGAGGT CGAGGACGAG CGGGCGGTGA TCGCCGCCGC GGCCGCGCGC GGGGTGGAGT TGGACGGGCT GGCCCGGCAC TACCTCGGTC CGCCCGAGCG TCAGGGGCTG GTCGTTGGCT ACGCCGGCCC CACTCCCGAC GAGCTGTCGG CCGCGCTGCG GGTGCTGGCC CACGTGCTGT GA
|
Protein sequence | MDLPPLPIDR RLPRSLAGQL ADGLRAAAIA GVLRPGDRLP STRSLSAQLE LSRTVCAAAY DQLLAEGWLA TRRGSGTFVV GVPAPGAVIP SASRPVPASL PGPRTPRPVL SLRAGVPCLA VLDRGMWRRA WRDAADAPVE RASDPEGLPP FRAAVVEHLL RHRGLPCDPE LVLATAGSTA TLAEIGAVLP AGVPVAVENP GYAGGASALR SAGRELVGVP VDADGIVVDA IPEGVSAVMV TPAHQYPLGA RLSAARRVEL VDRARRDGLL IVEDDYDGEL RYDVAPLPLL AALGPDVVVH LGTVSKMLTP GLGCGWLVAP PAVRAELVRR RAATGTRPSA AGQRVVTALA AHGDLARHLR RLRRELARRR AEVVAVVRGT GRLAMGDAAG AHVVVEVEDE RAVIAAAAAR GVELDGLARH YLGPPERQGL VVGYAGPTPD ELSAALRVLA HVL
|
| |