Gene Namu_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0648 
Symbol 
ID8446234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp712543 
End bp713904 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content78% 
IMG OID645039783 
Producttranscriptional regulator, GntR family with aminotransferase domain 
Protein accessionYP_003200052 
Protein GI258650896 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTGC CGCCGCTACC GATCGACCGG CGCCTGCCCC GATCCCTGGC CGGCCAACTG 
GCCGACGGGC TGCGGGCCGC CGCCATCGCC GGCGTGCTGC GCCCGGGCGA CCGCCTGCCG
TCCACCCGGA GCCTGTCGGC CCAGCTCGAG CTGAGCCGCA CCGTCTGCGC CGCCGCCTAC
GACCAGCTGC TGGCCGAGGG ATGGCTGGCC ACCCGACGGG GCAGCGGCAC GTTCGTGGTC
GGCGTGCCGG CGCCGGGTGC CGTTATCCCA TCCGCGTCCC GGCCGGTGCC CGCCTCGCTC
CCGGGGCCGA GAACCCCTCG GCCGGTGTTG TCACTGCGGG CCGGAGTGCC GTGCCTGGCG
GTGCTGGACC GCGGGATGTG GCGCCGGGCC TGGCGCGACG CGGCGGACGC CCCGGTCGAG
CGGGCGTCCG ATCCGGAAGG TCTGCCGCCG TTTCGCGCGG CGGTGGTCGA GCATCTGCTG
CGGCACCGGG GCCTGCCCTG CGACCCGGAG TTGGTGCTGG CCACCGCGGG CAGCACCGCG
ACCCTGGCCG AGATCGGTGC CGTGCTGCCG GCCGGCGTCC CGGTGGCCGT GGAGAACCCC
GGGTACGCGG GCGGAGCGTC GGCCCTGCGC TCGGCCGGCC GTGAGCTGGT CGGGGTGCCG
GTCGACGCCG ACGGGATCGT CGTCGACGCC ATCCCGGAGG GGGTGTCCGC GGTCATGGTC
ACCCCCGCCC ACCAGTACCC GTTGGGCGCC CGGCTGTCCG CCGCGCGGCG GGTGGAACTG
GTCGATCGGG CCCGCCGGGA CGGCCTGCTG ATCGTCGAGG ACGACTACGA CGGGGAACTG
CGTTACGACG TGGCCCCGCT GCCGCTGCTG GCCGCACTCG GGCCGGACGT GGTCGTGCAC
CTGGGCACGG TGTCCAAGAT GCTGACCCCG GGACTGGGCT GCGGCTGGCT GGTCGCGCCG
CCGGCGGTGC GGGCCGAGCT GGTCCGCCGG CGAGCCGCCA CCGGTACCCG CCCCTCCGCC
GCCGGCCAAC GGGTCGTCAC CGCGCTAGCC GCCCACGGCG ACCTGGCCCG GCACCTGCGC
CGGTTGCGCC GGGAGCTGGC CCGGCGGCGC GCCGAGGTGG TCGCGGTGGT GCGCGGCACC
GGCCGGCTGG CGATGGGCGA TGCGGCCGGC GCGCACGTGG TGGTCGAGGT CGAGGACGAG
CGGGCGGTGA TCGCCGCCGC GGCCGCGCGC GGGGTGGAGT TGGACGGGCT GGCCCGGCAC
TACCTCGGTC CGCCCGAGCG TCAGGGGCTG GTCGTTGGCT ACGCCGGCCC CACTCCCGAC
GAGCTGTCGG CCGCGCTGCG GGTGCTGGCC CACGTGCTGT GA
 
Protein sequence
MDLPPLPIDR RLPRSLAGQL ADGLRAAAIA GVLRPGDRLP STRSLSAQLE LSRTVCAAAY 
DQLLAEGWLA TRRGSGTFVV GVPAPGAVIP SASRPVPASL PGPRTPRPVL SLRAGVPCLA
VLDRGMWRRA WRDAADAPVE RASDPEGLPP FRAAVVEHLL RHRGLPCDPE LVLATAGSTA
TLAEIGAVLP AGVPVAVENP GYAGGASALR SAGRELVGVP VDADGIVVDA IPEGVSAVMV
TPAHQYPLGA RLSAARRVEL VDRARRDGLL IVEDDYDGEL RYDVAPLPLL AALGPDVVVH
LGTVSKMLTP GLGCGWLVAP PAVRAELVRR RAATGTRPSA AGQRVVTALA AHGDLARHLR
RLRRELARRR AEVVAVVRGT GRLAMGDAAG AHVVVEVEDE RAVIAAAAAR GVELDGLARH
YLGPPERQGL VVGYAGPTPD ELSAALRVLA HVL