Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0594 |
Symbol | |
ID | 8446178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 653558 |
End bp | 655588 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645039727 |
Product | UvrD/REP helicase |
Protein accession | YP_003199998 |
Protein GI | 258650842 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACA CTGGGTGGGA CGCCGGGCTG GACGACGCGC AGCTCTCGGC CGTGGTGCAC GGCGACGGCC CGCTGGTCAT CCTGGCCGGC GCGGGCACCG GCAAGACCCG CACCCTGACC GCCCGGGTGG CCAGCCTGCT GGACCGGGGC GTGCCGGCCG AGCGGGTCCT GCTGCTGACC TTCACCCGCC GCGCCGCGGA CGAGATGGTC TCCCGCGCGG CCCGGCTGTG CACGCAGCCG GACGCCGGAC AACGGCTGGC CGGCGGGACG TTTCACGCCG TTGCACACGC GGTGATCGGC CGGCACACCG AGGCCCTCGG CCTGCCGCCG GCGGTCAGCG TGCTCGACCG GGCCGACGCC ACCGACGTGA TGGATCTGCT CCGGCACGAC CACGGGTTGG ACGGCACCGA CCGCCGCTTT CCGCGGGCGG CCACCCTGGT GGACATCTAC TCGCGCGCGG TGAACACCGG CGTGCCGGCC CGGGCGCTGA TCAAGACCGA TTTCGGCTGG GTGCAGCCCC ACGTCGACGC GGTGATGGAG CTGTTCCGGG CCTATGTCGC GCGCAAACGC GACCGCGGTC TGCTCGATTT CGACGATCTG CTGCTGGCCT GGCGCAGCCT GCTGGCCGAT CCGGTGGTCG GTCCGCAGAT CGCCGGCCGT TGGGACCACG TCCTGGTCGA CGAGTACCAG GACGTGAATG CCACCCAGGT CGACATCGTG CACGCACTGC GGCCGGGAGG GCACGGGCTG ACGGTCGTCG GGGACGACGC CCAGGCCATC TACGGCTTCC GCGGGTCCGA CCACGCCCAT CTGCGAAGCC TGGTGCAGGA GCTGCCCGAG GTCACCGTGG TCCGGTTGGA ACGCAACTTC CGCTCGCATC AGCGGCTGCT CGATCTGGCC AACGTGGTCC GGCCCGGCGC CGAGGGCGAG CACCGGATCA CCCTGCACTC CGACCGGCGA GAGGGGCGAC CGGCCCGGTT GGTGCGCTGC CACGACGCCC CCGCCGAGGC CCGGATCATC GTCGACTCGG TGCTGGAGGC GCACCAGAAG GGGCGGCGGC TGCGGGAGCA GGCGGTGCTG ATGCGGGCCG CCGCGCACAG CGACCTGCTG GAGGTGGAAC TGACCGCCCG CGGAGTGCCC TTCGTCAAGT ACGGCGGTCT GAAGTTCCTG GAGGCGGCCC ACGTCAAGGA TTTCGTGGCC GCCGTGCGGC TGCTGGACAA CCCGCGGGAC GAGGTCGCCT GGTACCGGCT GCTGCGGCTG CACGACGGGA TCGGTCCGGC CCGGGCCCGC AGCCTGCTCG GGTCGCTGGC CGACCCGGAG CTCTCGGCCG ACCTGGACCG GCACGCCGAG GCGGTCGCGG CGGCCCCGGC GATGAGCCGG GTCGCTCTGG CCGCCAGCCT GTCCACCCTG GCCGACGCCC GGTCCCGGAA CCGAATCGGC GAGCGGGCCC GCGGCTGCCT GGAGCTGCTG CGGCCGCTGC TGACCGCCCG TTACCGGGAC TGGTCGGCCC GGCTGGGCGA CCTCGAACGA CTGGTCGGCG CGGCCGACCA GTCCCCCGAC CTGGCCGCGT TCGTGGCCGA GCTCACCCTG GACCCGCCCG CCTCGACCAG CGACCTGGCC GGACCGCCGA GCCAGGACGA CGACTACCTG GTGCTGTCCA CCGTGCATTC GGCCAAGGGT CTGGAATGGC CGGTGGTGCA CGTGCTGCAC CTGGTCGACG GCTCCTTCCC CTCGGACATG GCCCTGGGCA CCCCGGAAGG CGTCGAGGAG GAGGCCCGGT TGTTCTACGT CGCGCTCACC CGGGCCGCCG ACGAGCTGAA TCTGTATGCC CCGCTGCGGA TGCCGCACCA CCGGCACGCC CGGGACGACC GGCACTCGAT GGCGCCGCTG AGCCGGTTCC TGGACGACGC CGCGCTGGAT CGGGTCGAGG TGGTGGACTT GACCCCGCCG CGGCCGGGTG CCGACCCGGC CGGGGCCGCC GCCCGCGGGA CCCGGGTGGC GCTGCCCGAC CTGGCCGACC TCTGGGCCTG A
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Protein sequence | MFDTGWDAGL DDAQLSAVVH GDGPLVILAG AGTGKTRTLT ARVASLLDRG VPAERVLLLT FTRRAADEMV SRAARLCTQP DAGQRLAGGT FHAVAHAVIG RHTEALGLPP AVSVLDRADA TDVMDLLRHD HGLDGTDRRF PRAATLVDIY SRAVNTGVPA RALIKTDFGW VQPHVDAVME LFRAYVARKR DRGLLDFDDL LLAWRSLLAD PVVGPQIAGR WDHVLVDEYQ DVNATQVDIV HALRPGGHGL TVVGDDAQAI YGFRGSDHAH LRSLVQELPE VTVVRLERNF RSHQRLLDLA NVVRPGAEGE HRITLHSDRR EGRPARLVRC HDAPAEARII VDSVLEAHQK GRRLREQAVL MRAAAHSDLL EVELTARGVP FVKYGGLKFL EAAHVKDFVA AVRLLDNPRD EVAWYRLLRL HDGIGPARAR SLLGSLADPE LSADLDRHAE AVAAAPAMSR VALAASLSTL ADARSRNRIG ERARGCLELL RPLLTARYRD WSARLGDLER LVGAADQSPD LAAFVAELTL DPPASTSDLA GPPSQDDDYL VLSTVHSAKG LEWPVVHVLH LVDGSFPSDM ALGTPEGVEE EARLFYVALT RAADELNLYA PLRMPHHRHA RDDRHSMAPL SRFLDDAALD RVEVVDLTPP RPGADPAGAA ARGTRVALPD LADLWA
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