Gene Namu_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0561 
Symbol 
ID8446145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp622366 
End bp623838 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content71% 
IMG OID645039695 
Productgamma-aminobutyraldehyde dehydrogenase 
Protein accessionYP_003199966 
Protein GI258650810 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR03374] 1-pyrroline dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGT TCATCAATGG ACAGGTGAGG ACCTCCTCGT CGACCGGCGA AACGGCGCCG 
GTGATCGACC CGTCCACCGG CGCGATCATC GAACAGGTCG CGCTGGCCGG GCCCGCGGAG
GTCGATGAGG CGGTGCGGGC CGCGACCGCG GCGTACCGGT CGTGGTCGCG GGCGACGCCG
GGGGAGCGCT CGGCGGTGCT CGGCCGGTTC GCCCGGCTGC TGGCCGACCG GGCCGAGGAC
TTCGCCCAGG TGGAGAGCCG GCAGGCGGGC AAACCGATCC GGCTGACCCG CGAGTTCGAC
GTGCCCGGCA CCATCGACAA CATCGACTTC TTCGCCGGGG CCGCCCGCAA CCTAGAGGGC
AAGGCGACCG CCGAATACTC GGCCGACCAC ACCTCCTCGA TCCGGCGGGA GCCGGTCGGC
GTCATCGGGT CCATCGCGCC GTGGAACTAC CCGCTGCAGA TGGCGGCCTG GAAGATCCTG
CCGGCCATCG CCGCCGGCAA CACCATCGTG CTCAAGCCGG CCGAGATCAC CCCGCTCACC
TCGGTGATGT TCGCGCAGGC CGCGCAGGCG GCCGGACTGC CCGACGGGGT GGTCAACGTG
ATCACCGGCC GCGGTCCGGT GGCCGGGGCC GCGCTGCTGC GGCACCCGGC GGTCGCGATG
CTGTCCTTCA CCGGCTCCAC CGCGGTCGGC CGCACCGTGC TGGAGGCGGC CGCCACCACG
GCCAAGCGGG TCCACCTGGA GCTGGGGGGC AAGGCGCCGT TCGTCGTGTT CGACGACGCC
GACCTGGACG CGGCCATCCA CGGCGCGGTG GCCGGCAGCC TGATCAACAC CGGCCAGGAC
TGCACCGCCG CGACCCGGGC GATCGTGCAC CGCTCGCTGT ACCCGGACTT CGTGGCCGGG
GTGGCCGAGC TGTACGGCCG GGTCGTGCTC GGACCGACGG CCGACCCAGC CACCGACCTC
GGACCGTTGG TGTCGATGGC CCACCGGGAC AAGGTGGCCG GGATGGTCGA ACGGGCGCGC
GGCCTCGCCC GGGTGATCGG CGGCGGCATC CCCGGCGGCG AGTTGGCCGC CGGGTCGTAC
TACCGGCCCA CCCTGGTCGC CGACGCGCCG GTCGACAGCG AGATCGTCCG GGACGAGGTG
TTCGGCCCGG TGCTGGCCGC CTACTCGTTC GACTCCGACG AGCAGGCCAT CGAGCTGGCC
AACGACACCC CATACGGGCT GGCCGCCTCG GTCTGGACCC GGGACGTCTA CCGCGCGCTG
CGGGCCACCG GCGAGATCCG CGCCGGCTGC GTGTGGGTCA ACGACCACAT CCCGATCATC
AGCGAGATGC CGCACGGCGG GATGAAGCAA TCCGGCTTCG GCAAGGACAT GTCGAGCTAC
TCCTTCGACG AGTACACCGT GCTCAAGCAT GTCATGTACG ACCGCACCGC CAGAGTCCGA
AAGGATTGGC ACCGAACCAT TTTCACCGGC TAG
 
Protein sequence
MSQFINGQVR TSSSTGETAP VIDPSTGAII EQVALAGPAE VDEAVRAATA AYRSWSRATP 
GERSAVLGRF ARLLADRAED FAQVESRQAG KPIRLTREFD VPGTIDNIDF FAGAARNLEG
KATAEYSADH TSSIRREPVG VIGSIAPWNY PLQMAAWKIL PAIAAGNTIV LKPAEITPLT
SVMFAQAAQA AGLPDGVVNV ITGRGPVAGA ALLRHPAVAM LSFTGSTAVG RTVLEAAATT
AKRVHLELGG KAPFVVFDDA DLDAAIHGAV AGSLINTGQD CTAATRAIVH RSLYPDFVAG
VAELYGRVVL GPTADPATDL GPLVSMAHRD KVAGMVERAR GLARVIGGGI PGGELAAGSY
YRPTLVADAP VDSEIVRDEV FGPVLAAYSF DSDEQAIELA NDTPYGLAAS VWTRDVYRAL
RATGEIRAGC VWVNDHIPII SEMPHGGMKQ SGFGKDMSSY SFDEYTVLKH VMYDRTARVR
KDWHRTIFTG