Gene Namu_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0545 
Symbol 
ID8446129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp606718 
End bp607866 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content71% 
IMG OID645039679 
Producthistidine kinase 
Protein accessionYP_003199950 
Protein GI258650794 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACCA GCGCACTCCG CTCGCTGTGG GCCGAACCTC GACCCACGAA TGCCCCGGAC 
CTAGGCCCGC GGGACTGGGC GTTGGTCGCG GCACTGACCT GCTGGTCGGT GATCGAGGCG
GTGCTTCGTC AGGACCTGGC GTCGGGCCCG CTGCTGCTGC TCGCTGCGCT CGCGGTCATC
GGCCCCCTGC TGTGGCGGCG CACTCACCCG CTTCTCGCAG TGGTGGTCTG TTTCGGCACA
TTGACGATCG TCGACCTGGT CAGAATCCTC ACCGGGCCGC ACGGCGCTCT GCTGAACAGC
ACCGCTGCGA CGCTGATCCT GACCTACGCC CTGTTCCGGT GGGGCTCAGG CCGGGAAGCG
GTCTGCGGGC TCGGCATCGT CCTGCTCTGG CTGCCCATCA CCATCCACGG CGCCGACCCC
ACCAGCCTGG CCGAGGCGGT CGCGGGATAC GCGTTTTTCC TGTTCGCGGC TGCGCTGGGC
GCCGCGATCC GCTATCGCAC GAAGATCCGC ATCCGCGAGA TCGACCACGC CAAGGCCCGG
GAACGTGAAC AGCTCGCTCG CGAACTTCAC GACACGGTCG CCCACCACGT CTCGGGGATC
GTCATCCAGG CCCAAGCCGG ACGTGCCGTC GCGGCGTCGC ACCCCGAGCA GGCCGTCGAG
GCCCTGGCCG TCATCGAGGA CGCAGCGACC CGAACCCTCA CCGAGTTGCG GGCCATCGTC
GGCGTGCTCC GCGCCTCGCA GGACACCGAG TTGGCGCCGC AGCCCGGCGT GGCGCAGGTC
GAGCAGCTCG CCACCGATGG CCTGACGCGT CCCTGCGTCG AGGTGACGCT CTCCGGCGAG
TTCGACAACC TCAGCCCGGC AGTCGGGGCC GCGATCTACC GGCTGGCCCA GGAGTCCATC
ACCAACGCTC GACGGCATGC CCGCCACGCG ACCCAGGTCT CCGTCGCCGT CCACGGCGAC
GCCGACCAGG TACGGCTGAC CGTCGACGAC GACGGCTCCG CCGCCGGCGG ACGCGGCCCA
GCAGGCTACG GCCTGGTGGG CATGCGGGAA CGCGCTCTAC TGCTCGGCGG CACCTTCGAC
GCGGGCCCCG CCGCCGAGCG GGGTTGGCGG GTGGAGGCGG TCCTGCCCCG AACCGGGAGG
CCGCGATGA
 
Protein sequence
MATSALRSLW AEPRPTNAPD LGPRDWALVA ALTCWSVIEA VLRQDLASGP LLLLAALAVI 
GPLLWRRTHP LLAVVVCFGT LTIVDLVRIL TGPHGALLNS TAATLILTYA LFRWGSGREA
VCGLGIVLLW LPITIHGADP TSLAEAVAGY AFFLFAAALG AAIRYRTKIR IREIDHAKAR
EREQLARELH DTVAHHVSGI VIQAQAGRAV AASHPEQAVE ALAVIEDAAT RTLTELRAIV
GVLRASQDTE LAPQPGVAQV EQLATDGLTR PCVEVTLSGE FDNLSPAVGA AIYRLAQESI
TNARRHARHA TQVSVAVHGD ADQVRLTVDD DGSAAGGRGP AGYGLVGMRE RALLLGGTFD
AGPAAERGWR VEAVLPRTGR PR