Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0542 |
Symbol | |
ID | 8446126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 603794 |
End bp | 605113 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645039676 |
Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
Protein accession | YP_003199947 |
Protein GI | 258650791 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGA GTAGTTCGCT GCTGTTGGAC ATCGACGGGC TGGTCGTCGA CCAGGTCGTC CGCGACGACG TCGGCCGACG GGTCGTGCAC TGCTCGACCG ACCCGCAGCT GGCCGGCTGG TGCCCGGAGT GCGGTGAGCA GTCGAGGTCG CCGAAGGCGT GGGTGACGAC CCGCCCGCGG GACGTCCGGC TGGGCGAGGA TCGGCCGATC CTGTTGTGGC GCAAACGCAA ATGGCGCTGC CAGGTCGACG GCTGCGAGCG GAAGGTGTTC ACCGAGTGCC TGCCCGAGCA GATCCCCGCC CGGGCCCGGA TCACCACCCG GGCCCGCCGA CTGGCGGCCG AGGCGATCGG CGACCACACC CGGCCGGTGT CCGGTGTGGC GGCCGAATTC GGCATGGACT GGCGCGTTGC GCACGACGCG TTCGTCGCGC ACGCCGCGCA GGTGTTGCCC GAGCAGCCGC CGCCGGTGAC CGTGCTGGGC GTCGACGAGA CCCGCCGCGG CAAGGCCCAC TACGAGACCG ACCCCACCAC CGGGGCGAAG ACCTGGGTGG ACCGCTTCGA CACCGGCCTG GTCGATCTGA GCGGCAACGG CGGGCTGTTC GCGCAGGTCA ACGGCCGCAC CAGCAAGGTC CTCATCGAGT GGCTGCAGGC GCAGGACCCG GACTGGCTCG CCAACATCAC CCACATCTCG ATGGACACCA GCGCGACCTA CGCCCGGGCC GCCCGGCTGG CCCTGCCCGA TGCTGTCGTG GTCGTGGACC GGTTCCATCT GTCCGCCCTG GCCAACAAGG CGGTCACCGA CTACCGGCGG GAGTTGGCCT GGGCGCTGCG TGGCCGGCGG GGCCGCAAGA GCGACCCGGA GTGGGCGCAA CGGAACCGGC TGCTGCGGGC CGCGGAGTCC CTGACCGACG ACGAGCTGGC CAAGGTGCAG GATGCGATGC GTCGGGCGGA CCCGTCCGGC GGCCTTGAGA AGTGCTGGCA GGGCAAGGAA CTGCTCCGCA AGCTGCTCAA GCTGGCTGGC ACGAACCCGG ACCGCGGACG GATCTTCAAC GCGCTGACCG CGTTCTATCT GCATTGCGCC GACTCCGGGG TCGCGCAGCT GCGGCGGCTG GCGTGGACGG TGCACGCCTG GCAGAACTCG ATCATCGCCG GGCTGCACAC CGGGATCAGC AACGGCCGCA CCGAGGGCTA CAACCGGATC GTCAAACACA TCGGCCGGAT CGCCTTCGGC TTCCGCAACC AGGACAACCA GAAGCGCCGG GTACGCTACG CCTGCACCCG GAAATCCCGG GCGTCAACCA GCCACGCGAA GCCCTGCTAA
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Protein sequence | MDQSSSLLLD IDGLVVDQVV RDDVGRRVVH CSTDPQLAGW CPECGEQSRS PKAWVTTRPR DVRLGEDRPI LLWRKRKWRC QVDGCERKVF TECLPEQIPA RARITTRARR LAAEAIGDHT RPVSGVAAEF GMDWRVAHDA FVAHAAQVLP EQPPPVTVLG VDETRRGKAH YETDPTTGAK TWVDRFDTGL VDLSGNGGLF AQVNGRTSKV LIEWLQAQDP DWLANITHIS MDTSATYARA ARLALPDAVV VVDRFHLSAL ANKAVTDYRR ELAWALRGRR GRKSDPEWAQ RNRLLRAAES LTDDELAKVQ DAMRRADPSG GLEKCWQGKE LLRKLLKLAG TNPDRGRIFN ALTAFYLHCA DSGVAQLRRL AWTVHAWQNS IIAGLHTGIS NGRTEGYNRI VKHIGRIAFG FRNQDNQKRR VRYACTRKSR ASTSHAKPC
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