| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0522 |
|---|
| Symbol | |
|---|
| ID | 8446105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 580563 |
|---|
| End bp | 581762 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645039657 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003199929 |
|---|
| Protein GI | 258650773 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCAC CTGCGAACCG GATCAGCCTG ACGGCCGCGG TCGGCGGTGC GGTCGGCATC
GTCCTCGGGG TGGCGTCGCT GCTGGAGGCC TCGACCGATC CGGCCGGCGT GGGGCTGGAT
GCCCAGACGG TGACCACGGC CCTGGCCATC GCACTCGGCT GCGGGATCGC GCCGTTCCTG
CCGGTGCTCG GGTTGGCGGT CGGACTGGCC CCGATGGTGT TGGCCGTGCT GGTATTCCCG
GCCACCCCCG GCCCGGCCGG GTCGCTGCTG ATTGCGCTCA TCCTGCTCGT CGGCTATGCC
AGCTTCCGGC TGCCGCCGCG CCCCGGGCTC GCGGCGTACG TCGCGGCCTC CCTGGTCAGC
GGCACCTGCG TGGCCGTCCA GTCCGGCAGC GTGTGGGAGG CGGTGTTCTT CCCGCTCATC
CTGGGCGCCG GCTACGGGTT CGGAGTGTTG TTGCGGCGGG AGCGGTTTCG CTCGGCCGAG
CTGGCCCGGT TGGCCGATGA GCTGCGCGCC GAACGGGAGG CCCGGACCCG GGATGCGGTG
CTGGCCGAGC GGGCCCGGAT CTCCCGCGAG CTGCACGACG CGGTTGCGCA CACCGTCAGC
GTGATGACGC TGCAGGCGGG GGTGGTGCGC CGGCGGATGC CGGACGGCTC GCCCGAGCAG
GAGATGCTGC GGTCCGTCGA GGGGTTGGGC CGGCGGTCGG TGGACGAGCT GCGTCAGGTG
GTCGGGTTGC TGCGCACCGG CCCGTCCGGT TTCGAATCGG CCGACGAGGT GGGCCGGCAG
CCGTCGCTGA GGAACCTGCC GGACCTGACC GCCGACGTCC GGGCGGCCGG CCTGCCGGTT
CGGCTGGACG TGCGGGGGGA GGCCGTCGAG CTGCCGGACG CCGTCGACCG GTCCGCCTAC
CGGATCGTGC AGGAGGCGCT GTCCAACACC AGCCGGCACG CCGGGCCGGG GACCACCGCG
ACCGTCCGGA TCGATTACGG GCCCGACCGG GTCGTCATCG AGGTGCTCGA CGACGGCCGT
CCCGGCGTCG TCGAGCCGGC GTCGGGCGGG GGGTACGGGC TGGTGGGGAT GCGGGAACGG
GTCTCGCTCA TCGGCGGGTC CCTGACGGCG GGACCGCTTG CCCAGGGTGG GTTCTCGGTC
CGCGCGGACC TGCCGGTGAC GGCCGGGGCG ACCGGTGGTT CCACGGCGGT CCGGCGATGA
|
|---|
| Protein sequence | MRPPANRISL TAAVGGAVGI VLGVASLLEA STDPAGVGLD AQTVTTALAI ALGCGIAPFL
PVLGLAVGLA PMVLAVLVFP ATPGPAGSLL IALILLVGYA SFRLPPRPGL AAYVAASLVS
GTCVAVQSGS VWEAVFFPLI LGAGYGFGVL LRRERFRSAE LARLADELRA EREARTRDAV
LAERARISRE LHDAVAHTVS VMTLQAGVVR RRMPDGSPEQ EMLRSVEGLG RRSVDELRQV
VGLLRTGPSG FESADEVGRQ PSLRNLPDLT ADVRAAGLPV RLDVRGEAVE LPDAVDRSAY
RIVQEALSNT SRHAGPGTTA TVRIDYGPDR VVIEVLDDGR PGVVEPASGG GYGLVGMRER
VSLIGGSLTA GPLAQGGFSV RADLPVTAGA TGGSTAVRR
|
|---|
| |