| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0507 |
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| Symbol | |
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| ID | 8446090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 562148 |
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| End bp | 566197 |
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| Gene Length | 4050 bp |
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| Protein Length | 1349 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645039643 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003199915 |
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| Protein GI | 258650759 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGC ATCAGGCCCC GGACGCCGAA CGGACCGAAC GGCTGGCCGA CCTGACCATC
GTCGACCGGC GTCGGCTGCA GGGGCGGCTG CGCAGTGCCG AACGGATCCC GGACCCGGCC
AAACGCGACC TGGTGCTGGC CGAGATCGAT CACCAGCTCG AGGCCGGGGC AGCCCGGCTG
GCCCGGCGTC AGGCCGCGGT CCCCACGATC ACCTTCCCGG CCCAGCTGCC GGTCTCGGCC
CGGGTGCAGG ACCTGGCCCG CACCATCGCC GAGCACCAGG TGGTGATCGT GGCCGGGGAG
ACCGGGTCGG GCAAGTCGAC CCAGTTGCCC AAGTTGTGTC TGCAGCTGGG GCGGGGGGTC
CGCGGCATGA TCGGGCACAC CCAGCCCCGG CGGATCGCCG CCCGGGCGCT GGCCGAACGG
ATCGCCGAGG AGACCGGCAC CCAGCTGGGC GGCGCGATCG GCTACTCGAT CCGGTTCGGC
GACCACACCG GCCCGACCAC CCTGGTCAAG CTGATGACCG ACGGCATCCT GCTCACCGAG
ATCGCCCGGG ACCGGATGCT GTGGGCCTAC GACACGATCA TCATCGACGA GGCCCACGAG
CGAAGCCTGA ACATCGACTT CCTGCTGGGC TACCTGCAGG GCCTGCTGCC GCAGCGTCCC
GATCTCAAGT TGATCATCAC CTCGGCCACC ATCGATCCCG GCAAGTTCTC CCGCCACTTC
GCCGACGCCC CCGTCGTCGA GGTCTCCGGG CGGACCTTCC CGGTCGAGAT CCGTTACCGG
CCCTACGGTC TGGACGCGCT GCCGGAGGTG GACGATCCGG ACGCCGAGCA GTCCCGCGGT
TCCTCCGAAT CGGCCGACCA GGGTCAGGCG ATCACCGCCG CGGTCGACGA GCTGCTGGCC
GCCGGGGACG GCGACATCCT GGTCTTCCTG TCCGGCGAGC GGGAGATCAC CGACACCACC
GAGGTGTTGC GCGGCCACCT GGCCGGCCGG CGGGGCCTGA CCGAGGTGCT CCCGCTGTAC
GGGCGGCTGT CCTCGGCCGA TCAGCACAAG GTCTTCTCCG CGCACCCCGG ACGGCGGATC
GTGCTGTCCA CCAACGTGGC CGAAACCTCG CTGACCGTCC CCGGGATCCG GTACGTGATC
GACCCCGGCA CCGCCCGGAT CTCGCGGTAC TCGCCGCGCA GCAAGGTGCA GCGGCTGCCG
ATCGAGCCGA TCTCGCAGGC CTCGGCCGGT CAGCGGGCCG GCCGCTGCGG CCGGGTGGCC
AACGGCATCT GCATCCGGCT GTACTCGGAG AAGGACTTCG ACGAGCGGCC CGCCTACACC
GACCCGGAGA TCGCCCGCAC CTCGCTGGCC TCGGTCATCC TGCAGATGGC CGCCCTGGAA
CTCGGCGACA TCGTCGACTT CCCGTTCCTG GACCCGCCCG ACCAGCGGCA GATCACCGAC
GGCGTCACCG TGCTCACCGA GCTGGGGGCG ATCGACCGCA GCGCCGGCGA CCGGGTCCGG
CTGACCCCGA CCGGCCGGGA GATGGCCGAC CTGCCGCTGG ATCCCCGGCT GGCCCGGATG
CTGGTGGAGG GCGAGCGGCG CAACGTCCGG CGGGAGATGC TCGTGCTGGT CTCCGCGCTG
GCCGTCATCG ACGTCCGCGA GTACCCGCTG GACGAGCGGG ACAAGGCGAC CGCCGCGCAC
GCCCGTTTCG TCGACGGCAA CTCGGACTTC AACGCCCTGA TCAGCCTCTG GGCGTACCTG
GAGGAGCAGG CGAAAACTCA GTCCGGCAAC GCCTTTCGCC GGATGTGCCG CCGCGAGTAC
CTGAACTACC TGCGCATCCG GGAATGGCAG GACCTGCACG CCCAGCTCAG CCAACTGCTC
GACGGCGGGC GCCGTCGCGG TGGCCGGCGC CGGCCGGATC GGCCCGCCCC GGCCGACCGG
GGCAGCCTGC CCCAGCGACG CGATCCGGAC GCCACTCAGG GTGGCCGCGG CTCGCTGGCC
GTGGACGTTG ACACCGAGCG GGTGCACACC GCCCTGCTGG CCGGGCTGCT CTCGCACATC
GGGCTGCGCA AGGAGGGCAC CCGCGAATAC CAGGGCACCC GCGGCATCTC CTACTCGATC
TGGCCCGGCT CGGCGCTGGC CCGCACCGGC CCGGTCCTGG TGGTGGCCGC CGAACTGGTC
GAGACCAGCC GGTTGTGGGC GCGGATCTGC GCCCGGGTCG AACCCGGCTG GGTCGAGCAG
GTCGGCGCGG ACCTGTTGCG CCGCAACTAC TCCGAACCGC GGTGGAACGG CAAGCGGGCC
AGCGTGGAGG CCACCGAGAA GGTGACCCTG CTCGGCGTCA CCCTAATCGC CGCCCGCACG
GTGCAGTTCG ACCGGATCGA CCCGGAACTG TCCCGGGAAC TGTTCATCCG CCATGCCCTG
GTCGAGCGGG ACTGGCAGAC CCGGCACCGG TTCTTCGCCG ACAACCAACG GGCCCTGGAA
CAGGTCACCG AGTGGGAGGA ACGGGCCCGG CGGCGGGACA TCCTGATCGA CGACGACACC
ATGTTCGCCC TCTACGACGC GCGGATCCCG CCGCAGGTCA CCTCGGGCCG GCACTTCGAC
TCCTGGTGGA AGAAGGCCTC CCGCACCCAG CCCGACCTGC TCACGCTCAC CCCGGACATG
CTGATCGCGG CCGGCGCCGA GCGGTTCGAC TCGGCCGCGT TCCCCGACCG GTTCACCTCC
GGCGAGGTGG AGCTGCCGCT GGACTACGTG TTCGACCCCG GTCGGGCCGA CGACGGGGTG
ACCGTGAGCA TCCCGCTGCC CGTGCTGGCC CGGGTGGACC CGGCCGGCTT CGAGGCCCAG
ATTCCCGGCC TGCGCGCCGA TCTGGCCGTC GCGCTGATCC GCACCCTGCC CAAGACGCTG
CGGCGCAACT TCGTGCCCGC CCCCGATTTC GCCCGGGCCG CGTTGGACCG TATCGATGCC
GCCCGCCCGC TGGCCGAAGA ACTTGCCGGC GCGTTGACCC GGATGACCGG GGTGGTCGTC
CGTACGGCCG ACTTCGACCC GGACAAGGTG CCCGAGCACC TGCGGATGAA CTTCCGCATC
GTCGACGAGC ACGGCGCCAC CGTGGCCAGC GGCCGGGACC TGCCGACGCT GCAGTCGACG
CTGCGCACGG ACACCCAGCG GGCGGTGGTC CAGGCCACCA AGTCGCTGGA ACGCCATGGC
CTGACCGCCT TTCCCGAGCC CGGGGTGCCG CGGCGGGTGC GGGCGCGGGT GGCCGGGCAC
GAGGTCACCG GGTACCCGGC GCTGGTGGTG GAGGGGCCGG GCACCGTCGG TGTAGCCGTC
TTCGACAGCG AGGCCGACCA GCGCCGCGCC ATGCGGGCCG GCACCATCGA GCTGCTGGCC
GCCGCGCTGA CCCCGTCGCT GACCCGGGTC CGGCAGCTGC TCACCCGCGA GCAGCAGATC
ACCCTGGCCA CCGCGCCCGG CACCACCATC CCAACCCTGG TCGCCGACGC CACCCGGGCC
GCGGTGGACG CCCTGCTCGA CTGGGCGGGC GGGCCGAGCT GGAGTGCGGC CGGCTTCGCC
GCGGTCCGGA CCAAGCTGAC GCCGAGCATG CTCACGTCGG TCCGCGACGT GCTGGCCGCC
GCCGAGACGG TGCTCAGCGC GGCCGGCGCG GCCGCGCGAG CGCTGGACAC CGCGGAGCGA
GGCCCAGGGG CGGCCGCGGT CGCCGACCTG ACCCGGGACA TGCGCGCCCA GTGGCGGGCG
GCGGTGGCCC CCGGGTTCAT CGTGGCCACC GGCGCGGCCG GCCTGCCCGA CCGGGCCCGG
CAGCTGCAGG CACTGCGGAT CCGGGCGGAG CGGGTCCGCG AGGCGGCCGG GCGGGACCGG
GAGCGCCTCG CCGAGATCCG CGAATTGCAG GCCGAGGTGG ACCGCGCGGT CGAGGAGCTC
CCCGAGGAGC GCCGGTCGGA CCCGGACGTG CAGGCCCTGC ACCACCTGCT GGCCGAGTAC
CGCGTCGCCC TGTTCGCGCA GCCGATGCGC ACGTCGGTGC CGGTCTCGGC CAAGCGCATC
CGATCGGCCG CCGCGGCGCT GGGCGGCTGA
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| Protein sequence | MSVHQAPDAE RTERLADLTI VDRRRLQGRL RSAERIPDPA KRDLVLAEID HQLEAGAARL
ARRQAAVPTI TFPAQLPVSA RVQDLARTIA EHQVVIVAGE TGSGKSTQLP KLCLQLGRGV
RGMIGHTQPR RIAARALAER IAEETGTQLG GAIGYSIRFG DHTGPTTLVK LMTDGILLTE
IARDRMLWAY DTIIIDEAHE RSLNIDFLLG YLQGLLPQRP DLKLIITSAT IDPGKFSRHF
ADAPVVEVSG RTFPVEIRYR PYGLDALPEV DDPDAEQSRG SSESADQGQA ITAAVDELLA
AGDGDILVFL SGEREITDTT EVLRGHLAGR RGLTEVLPLY GRLSSADQHK VFSAHPGRRI
VLSTNVAETS LTVPGIRYVI DPGTARISRY SPRSKVQRLP IEPISQASAG QRAGRCGRVA
NGICIRLYSE KDFDERPAYT DPEIARTSLA SVILQMAALE LGDIVDFPFL DPPDQRQITD
GVTVLTELGA IDRSAGDRVR LTPTGREMAD LPLDPRLARM LVEGERRNVR REMLVLVSAL
AVIDVREYPL DERDKATAAH ARFVDGNSDF NALISLWAYL EEQAKTQSGN AFRRMCRREY
LNYLRIREWQ DLHAQLSQLL DGGRRRGGRR RPDRPAPADR GSLPQRRDPD ATQGGRGSLA
VDVDTERVHT ALLAGLLSHI GLRKEGTREY QGTRGISYSI WPGSALARTG PVLVVAAELV
ETSRLWARIC ARVEPGWVEQ VGADLLRRNY SEPRWNGKRA SVEATEKVTL LGVTLIAART
VQFDRIDPEL SRELFIRHAL VERDWQTRHR FFADNQRALE QVTEWEERAR RRDILIDDDT
MFALYDARIP PQVTSGRHFD SWWKKASRTQ PDLLTLTPDM LIAAGAERFD SAAFPDRFTS
GEVELPLDYV FDPGRADDGV TVSIPLPVLA RVDPAGFEAQ IPGLRADLAV ALIRTLPKTL
RRNFVPAPDF ARAALDRIDA ARPLAEELAG ALTRMTGVVV RTADFDPDKV PEHLRMNFRI
VDEHGATVAS GRDLPTLQST LRTDTQRAVV QATKSLERHG LTAFPEPGVP RRVRARVAGH
EVTGYPALVV EGPGTVGVAV FDSEADQRRA MRAGTIELLA AALTPSLTRV RQLLTREQQI
TLATAPGTTI PTLVADATRA AVDALLDWAG GPSWSAAGFA AVRTKLTPSM LTSVRDVLAA
AETVLSAAGA AARALDTAER GPGAAAVADL TRDMRAQWRA AVAPGFIVAT GAAGLPDRAR
QLQALRIRAE RVREAAGRDR ERLAEIRELQ AEVDRAVEEL PEERRSDPDV QALHHLLAEY
RVALFAQPMR TSVPVSAKRI RSAAAALGG
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