Gene Namu_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0486 
Symbol 
ID8446069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp537799 
End bp539025 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content74% 
IMG OID645039622 
Productputative signal transduction histidine kinase 
Protein accessionYP_003199894 
Protein GI258650738 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAGG TCCAACAGAT CGTCCGCGAC GCCGCCCAGC GCGGGCTGAA CCTGCAGTTG 
ACGCTGCGAG CGCTGCTGGC CGCCTTCGTG CTCGGCACCC TGGCGTTCCT GCCGCCCGCG
GACGCCGCCG AGCTGTCCTG GTGGGTGGCC GGCGGTTACC TGGTCGCGGT GGCCGGGCTG
ACCCTGTGGC TGCGCCGGGG CGACCGGATC GCGCTGACCT GGGGCTGGCT GGGTCTCTAC
GTCGACCTGA TCGCCCTGCT CACGCTGACC CAGATCGCCG GCTGGTCGGC CGATCAGAGC
TGGACCTCCT ACGTCCTGCA GTTCGGCTTC TTCCTCATCC CGGTGCTGGC CGCCACCCAG
TTGCGCTGGG GCGTGTGCGC CGGCGTGGTG ATCCCGACGG TGCTGCTGTA CGCGGCCGAG
GGCCTGCTCA CCCGCGACGC CAACGAGGTC GAGCCGATCC CGTCGATCGT GCTGCGGGTG
GTCGCGCTGG CCGGCGTCGG CCTGGCCGCG GTCTGGCTGT CCCGGATCCA GCGGTCGCGG
GTGGCCTCGA TCCAGGCGCT GGTGGACGAC CGGACCCGGT TGCTGACCGA GCTGATGACC
GCGACCGACA GCGCCCACCG GGCGATGGCC GAGAACCTGC ACGACGGCGC CCTGCAGTAC
GTGCTGGCCG CCCGGATGGA TCTGGAGGAC GCCCGGGACG GCGCCCCGGA CGAGGCCGCG
CGGTCCTTCG ACCGGCTCGA CGACGCGCTC ACCCAGACGG CCAAGCTGTT GCGCTCGACC
GTCTCCGAGC TGCACCCGGC CGTGCTGGAG CAGTCCGGGC TGGCCCTGGC GGTCGGGCAA
CTGGCCGGCA CGGCGGCCGA ACGGGGCGGG CTGACGGTGT CGGTGGAGTC CGCCGGCTGG
CCCGACGAGG CCCGCACCGA TCAGGATCAG CTGCTGTTCG GGGTGGCCCG GGAGCTGATC
AGCAACGTCG TCCGGCACGC GCACGCGTCG CGGATGGCGA TCGGGCTGGA GCTGGCCGAC
GGGGTGGCCG AGCTGACCGT GAGCGACGAC GGCATCGGGT TCACCCCGGG GACGGCGGCC
CGCAAGCTGT CCGAGGGGCA CATCGGGGTC GACTCGCAGC GGGTCAAGGT GGAGGCGGCC
GGCGGCCGGT TCAGCGTGGA CAGCCCGGCC GCCGGCGGCG CCACGGTCCG GGTGCAGGTG
CCGGTCAGGG CAGCTGGAAC CGGGTGA
 
Protein sequence
MTQVQQIVRD AAQRGLNLQL TLRALLAAFV LGTLAFLPPA DAAELSWWVA GGYLVAVAGL 
TLWLRRGDRI ALTWGWLGLY VDLIALLTLT QIAGWSADQS WTSYVLQFGF FLIPVLAATQ
LRWGVCAGVV IPTVLLYAAE GLLTRDANEV EPIPSIVLRV VALAGVGLAA VWLSRIQRSR
VASIQALVDD RTRLLTELMT ATDSAHRAMA ENLHDGALQY VLAARMDLED ARDGAPDEAA
RSFDRLDDAL TQTAKLLRST VSELHPAVLE QSGLALAVGQ LAGTAAERGG LTVSVESAGW
PDEARTDQDQ LLFGVARELI SNVVRHAHAS RMAIGLELAD GVAELTVSDD GIGFTPGTAA
RKLSEGHIGV DSQRVKVEAA GGRFSVDSPA AGGATVRVQV PVRAAGTG