| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0474 |
|---|
| Symbol | |
|---|
| ID | 8446055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 524691 |
|---|
| End bp | 525431 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645039608 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003199882 |
|---|
| Protein GI | 258650726 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGC TGCCGAAGTT CGTCCAGATG GCCAACCGCG TTCGTGACCG GATCCTGAGC
GGCGATTTAC GACCCGGCGA CGAGGTTCCG TCCGAACGTG CGCTGGCCAC CGAATGGGGG
GTCGCCCGCC CCACTGCGGC CCGGGCCTTG CAGGAACTCC GCTCCCTGGG CCTGGTCGAA
TCACGTCAGG GTTCGGGCTC GTACGTGCGG GAGGGGACGG CGAACGTCTA CCGGCGCGCG
AAGGATCGGT ACGCCCGTTC GGCGTCGGCG GGCCGGGTCT ACGCCGAGGG GGAGTGGGCT
CGGATCGTTG CGGCGAAGCG GGCCCAGGCA CCCGGTCACG TTGCGAAGGC GCTCGGCGTC
GATGAGGGTT CGACCGTCGG ACGGCGTCAA CGGATCCTGG GCGACGGCAG CGGTCCGACG
GAGATCTCGA CATCCTGGTT CCCGATCGAC ATCGTCGAGG TCGCGCCGAA CCTGATGAGC
CGCAACCGGA TTCGCGAGGG GTCGCTCGCC TACATCGAGT CCTGCACGGG CCGGCGCGGC
CAGGTCGCGC GCGATCAGCT GTCGGCCCGG ATGGCGTCCG CCGCCGAGCG CCGGGAGCTG
TACCTCGACA ATCCTTCCGC GGTCCTTGTC GTTCTCCACG TCGTGGTCGA CCGAAAGAAC
CAGCCGCTGG AGGTCGTCGA CGCGGTGTAC CCGCCGGCCG GCCGGTGGTT TCTCGATCAG
GAATACCCGC TCGGCAGCTG A
|
|---|
| Protein sequence | MGELPKFVQM ANRVRDRILS GDLRPGDEVP SERALATEWG VARPTAARAL QELRSLGLVE
SRQGSGSYVR EGTANVYRRA KDRYARSASA GRVYAEGEWA RIVAAKRAQA PGHVAKALGV
DEGSTVGRRQ RILGDGSGPT EISTSWFPID IVEVAPNLMS RNRIREGSLA YIESCTGRRG
QVARDQLSAR MASAAERREL YLDNPSAVLV VLHVVVDRKN QPLEVVDAVY PPAGRWFLDQ
EYPLGS
|
|---|
| |