Gene Namu_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0407 
Symbol 
ID8445988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp439150 
End bp439635 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content67% 
IMG OID645039544 
ProductTrkA-C domain protein 
Protein accessionYP_003199818 
Protein GI258650662 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTCA CTGAGACTCT TCTTCCGGGT GTTGGCATCC GGTATGAGTT CGTTACCAGG 
TCCGGCGCCC ATATCGGTCT GATCTCCCGT CGGGACGGAC GCATCGATGT CGGCGTGTAC
GACCGGAGCG ACGCGGATGT GTGGATCGAG CTGGTCCGCC TTACTCCGGC GGAGGCCGAC
ACCTTGGCCG AGTTGCTCGG CGCGCCACGC ATCGCTGAGA GATTCGCCGA TCTGACCAGG
GAGATCCCCG GACTTGTCGC GGCCCAGGTC GAGATTGAAC CGGGATCGAC CTTCGCCGGG
CGGACTCTCG GGGAGACACG TGCACGCTCG CGGACGGGCG CCTCTGTGGT TGCGGTCGTC
CGGTCTGCCG GAGTCGTCGC CGCTCCTACT CCGAGCCAGC CGCTGACCGC CGGCGACGTG
CTGGTGGTGT TGGGCACGGA GGACGGCATC GCCGCGCTCC GGCGGATCCT GACCGGGGTG
GGGTAG
 
Protein sequence
MDVTETLLPG VGIRYEFVTR SGAHIGLISR RDGRIDVGVY DRSDADVWIE LVRLTPAEAD 
TLAELLGAPR IAERFADLTR EIPGLVAAQV EIEPGSTFAG RTLGETRARS RTGASVVAVV
RSAGVVAAPT PSQPLTAGDV LVVLGTEDGI AALRRILTGV G