Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0403 |
Symbol | |
ID | 8445984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 435147 |
End bp | 436628 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645039541 |
Product | amino acid carrier protein |
Protein accession | YP_003199815 |
Protein GI | 258650659 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACGG CATTCGTCGC TGCGGAGGAA ACCGAGCCGT CCGGCATCGA CGCGGCGGTC AACGACGCCG TTGGTCCGAT CGCGACCTGG ATCGAAGGGA TCGTGTTCTA CCGCTTCGAA TTCTTCGGCG TCGGCGTTCC GGTCATCGTG CTCTGGCTCA TCACCGGTGC GGTCTTCTTC ACGATCTTCT TGGGCTTCAA GAACATTGTT GGGTTCAAGC ACGCCATCGA TCTGGTCCGC GGCCGGTACT CCCACCCGGA GGACGCCGGG GAGGTGTCCC ACTTCCAGGC CTTGGCCACG GCGGTCTCCG GCACGGTGGG CCTGGGGAAC ATCGCCGGGG TCGCGGTGGC CATCAGCCTC GGCGGACCGG GTGCGACGTT CTGGATGATC GTCGCCGGGT TCTTCGGGAT GAGCCTGAAG ATGGCCGAAT GCACCCTTGG GGTCAAGTAC CGCAAGGAGC ATGCGGACGG CTCGGTGTCC GGCGGCCCGA TGTACTACCT GCGCGACGGC ATCGCGAAAC TGGGTAAGCC CCGGCTCGGC AAGGTGATGG CCATCGTCTT CGCCGTCTGC TGCGTCGGCG GGTCTCTCGG CGGCGGCAAC ATGTTCCAGT CGAATCAGGC CACCGCGCTG ATCGTCGAGG TCTTCGGCGG CGAGGACTAC AAATGGGCGT TCGGGCTGGT CTTCGCGATC CTGGTGGCGC TGGTGATCAT CGGTGGCATC AAGTCGATCG CCAGGGTCAC CGACAAGATC GTGCCGTTCA TGGCGGTGCT GTACATCACC GCAGCGCTGG TCGTCATCTT CGCGAACGTC TCGATGATTC CGGCCGCGTT CGGTCAGATC ATCAGCGGCG CGTTCAACCC GGAGGGGGTC GTTGGCGGGG TCGTCGGCGT TCTCATCGTG GGATTCCAGC GGGCCGCATT CTCCAACGAG GCCGGCGTCG GGTCGGCGTC GATCGCGCAC TCGGCGGTCC GGACGAAGGA ACCTGCCACC GAGGGTTTCG TGTCCCTGCT GGAGCCGTTC ATCGACACCA TCGTCATCTG CACCATGACG GCCCTGGTCA TCGTCATCAC CGGTGTCTGG GACGATCCCA ATTCCTCGGA GCTCGGCGGG GTCGGGTTGA CAACAGCCGC CTTCCAGTCG GTACTGCCAT GGTTCCAGTT TGTCCTGGTG GTCGCGGTCG TGCTGTTCGC GTTCTCCACC ATGATCGCCT GGTCGTACTA CGGCATGAAG GCCACCGGCT ACCTGTTCGG CGACAGCGCC AAAGCGGAGA ACATCTTCAA GGCCGTCTTC TGCGTCTTCA CCCTGATCGG CGCAACGCTG TCACTCGGTC CGGTCATCGG GTTCTCCGAC TCGATGATCT TCCTGATGTC GGTCCCCAAC CTCATCGGCC TGTACCTGCT CGCCCGGGTG CTCAAGAAGG AGATCAACGG GTACTGGGAA CGAATCCAAT CCGGCGAGAT CGAAATGGTC GACAAGCACT GA
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Protein sequence | MATAFVAAEE TEPSGIDAAV NDAVGPIATW IEGIVFYRFE FFGVGVPVIV LWLITGAVFF TIFLGFKNIV GFKHAIDLVR GRYSHPEDAG EVSHFQALAT AVSGTVGLGN IAGVAVAISL GGPGATFWMI VAGFFGMSLK MAECTLGVKY RKEHADGSVS GGPMYYLRDG IAKLGKPRLG KVMAIVFAVC CVGGSLGGGN MFQSNQATAL IVEVFGGEDY KWAFGLVFAI LVALVIIGGI KSIARVTDKI VPFMAVLYIT AALVVIFANV SMIPAAFGQI ISGAFNPEGV VGGVVGVLIV GFQRAAFSNE AGVGSASIAH SAVRTKEPAT EGFVSLLEPF IDTIVICTMT ALVIVITGVW DDPNSSELGG VGLTTAAFQS VLPWFQFVLV VAVVLFAFST MIAWSYYGMK ATGYLFGDSA KAENIFKAVF CVFTLIGATL SLGPVIGFSD SMIFLMSVPN LIGLYLLARV LKKEINGYWE RIQSGEIEMV DKH
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