Gene Namu_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0403 
Symbol 
ID8445984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp435147 
End bp436628 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content63% 
IMG OID645039541 
Productamino acid carrier protein 
Protein accessionYP_003199815 
Protein GI258650659 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGG CATTCGTCGC TGCGGAGGAA ACCGAGCCGT CCGGCATCGA CGCGGCGGTC 
AACGACGCCG TTGGTCCGAT CGCGACCTGG ATCGAAGGGA TCGTGTTCTA CCGCTTCGAA
TTCTTCGGCG TCGGCGTTCC GGTCATCGTG CTCTGGCTCA TCACCGGTGC GGTCTTCTTC
ACGATCTTCT TGGGCTTCAA GAACATTGTT GGGTTCAAGC ACGCCATCGA TCTGGTCCGC
GGCCGGTACT CCCACCCGGA GGACGCCGGG GAGGTGTCCC ACTTCCAGGC CTTGGCCACG
GCGGTCTCCG GCACGGTGGG CCTGGGGAAC ATCGCCGGGG TCGCGGTGGC CATCAGCCTC
GGCGGACCGG GTGCGACGTT CTGGATGATC GTCGCCGGGT TCTTCGGGAT GAGCCTGAAG
ATGGCCGAAT GCACCCTTGG GGTCAAGTAC CGCAAGGAGC ATGCGGACGG CTCGGTGTCC
GGCGGCCCGA TGTACTACCT GCGCGACGGC ATCGCGAAAC TGGGTAAGCC CCGGCTCGGC
AAGGTGATGG CCATCGTCTT CGCCGTCTGC TGCGTCGGCG GGTCTCTCGG CGGCGGCAAC
ATGTTCCAGT CGAATCAGGC CACCGCGCTG ATCGTCGAGG TCTTCGGCGG CGAGGACTAC
AAATGGGCGT TCGGGCTGGT CTTCGCGATC CTGGTGGCGC TGGTGATCAT CGGTGGCATC
AAGTCGATCG CCAGGGTCAC CGACAAGATC GTGCCGTTCA TGGCGGTGCT GTACATCACC
GCAGCGCTGG TCGTCATCTT CGCGAACGTC TCGATGATTC CGGCCGCGTT CGGTCAGATC
ATCAGCGGCG CGTTCAACCC GGAGGGGGTC GTTGGCGGGG TCGTCGGCGT TCTCATCGTG
GGATTCCAGC GGGCCGCATT CTCCAACGAG GCCGGCGTCG GGTCGGCGTC GATCGCGCAC
TCGGCGGTCC GGACGAAGGA ACCTGCCACC GAGGGTTTCG TGTCCCTGCT GGAGCCGTTC
ATCGACACCA TCGTCATCTG CACCATGACG GCCCTGGTCA TCGTCATCAC CGGTGTCTGG
GACGATCCCA ATTCCTCGGA GCTCGGCGGG GTCGGGTTGA CAACAGCCGC CTTCCAGTCG
GTACTGCCAT GGTTCCAGTT TGTCCTGGTG GTCGCGGTCG TGCTGTTCGC GTTCTCCACC
ATGATCGCCT GGTCGTACTA CGGCATGAAG GCCACCGGCT ACCTGTTCGG CGACAGCGCC
AAAGCGGAGA ACATCTTCAA GGCCGTCTTC TGCGTCTTCA CCCTGATCGG CGCAACGCTG
TCACTCGGTC CGGTCATCGG GTTCTCCGAC TCGATGATCT TCCTGATGTC GGTCCCCAAC
CTCATCGGCC TGTACCTGCT CGCCCGGGTG CTCAAGAAGG AGATCAACGG GTACTGGGAA
CGAATCCAAT CCGGCGAGAT CGAAATGGTC GACAAGCACT GA
 
Protein sequence
MATAFVAAEE TEPSGIDAAV NDAVGPIATW IEGIVFYRFE FFGVGVPVIV LWLITGAVFF 
TIFLGFKNIV GFKHAIDLVR GRYSHPEDAG EVSHFQALAT AVSGTVGLGN IAGVAVAISL
GGPGATFWMI VAGFFGMSLK MAECTLGVKY RKEHADGSVS GGPMYYLRDG IAKLGKPRLG
KVMAIVFAVC CVGGSLGGGN MFQSNQATAL IVEVFGGEDY KWAFGLVFAI LVALVIIGGI
KSIARVTDKI VPFMAVLYIT AALVVIFANV SMIPAAFGQI ISGAFNPEGV VGGVVGVLIV
GFQRAAFSNE AGVGSASIAH SAVRTKEPAT EGFVSLLEPF IDTIVICTMT ALVIVITGVW
DDPNSSELGG VGLTTAAFQS VLPWFQFVLV VAVVLFAFST MIAWSYYGMK ATGYLFGDSA
KAENIFKAVF CVFTLIGATL SLGPVIGFSD SMIFLMSVPN LIGLYLLARV LKKEINGYWE
RIQSGEIEMV DKH