Gene Namu_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0395 
Symbol 
ID8445976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp428030 
End bp428752 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID645039536 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003199810 
Protein GI258650654 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCAC TGCCCCCCGA TTCTGGTTCC GCGCCCACCC GTGTCTTGCT GGTCGAGGAT 
GACGAGCGCA TTCGCTTGGC GCTGGGGTTG GCCCTGGGTG ACCTGGGTTT CCAAGTGCGG
GATGCGGCAT CCGGCGAGCT CGCCCTGGAA CGCCTTGAGG TGGCCGACGT CGATGTGGTG
CTACTGGATC TGATGCTGCC CGGCGTGGAC GGGCTCACCG TGTGCCGGAC GCTCCGGGCC
AGGGGTGATT TGCCGATCAT CATCACGACC GCTCGTTCGG ACACGGCCGA CGTGATCGCC
GGCTTGGAGG CGGGGGCGGA CGACTACATG TCCAAGCCAT TGGTGGCCAG TGAGTTGGCT
GCCCGAATTC GGGCGTTGCT CCGTCGCCGG CGACCGGTGA GCAACACCAC CGTCCAGTCT
TACGTCCAGG TTGCCGACCT CGAAGTCTGG CCCATGGAAG GGCGGGTTCG CCGGGCCGGC
GCCGACGTAC ACCTCACTCG GACGGAATTT CGACTGCTGG CCGAGCTGGT CTCCGCCGAT
GGAGTGGTCG TGACCCGGGA GGAGCTGTTG CATCGAGTCT GGGGTTATGA CTACTTCGGC
GATACCCGCC TGCTGGATGT GCACATCCGT CGACTGCGGC GGAAGGTGGA GACCGACCCC
GACAACCCGG CCCTGATCAC CACTGTCCGG GGCCTGGGTT ACCGCTTCAG CTCGTCGCGG
TGA
 
Protein sequence
MPSLPPDSGS APTRVLLVED DERIRLALGL ALGDLGFQVR DAASGELALE RLEVADVDVV 
LLDLMLPGVD GLTVCRTLRA RGDLPIIITT ARSDTADVIA GLEAGADDYM SKPLVASELA
ARIRALLRRR RPVSNTTVQS YVQVADLEVW PMEGRVRRAG ADVHLTRTEF RLLAELVSAD
GVVVTREELL HRVWGYDYFG DTRLLDVHIR RLRRKVETDP DNPALITTVR GLGYRFSSSR