Gene Namu_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0389 
Symbol 
ID8445970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp422565 
End bp423656 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content67% 
IMG OID645039530 
Productglycoside hydrolase family 76 
Protein accessionYP_003199804 
Protein GI258650648 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4833] Predicted glycosyl hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCG GTCGAGCCGC GAGAATGCTG GCCGTGCTAG TGGCCGGCTC GCTGCTGGTC 
GGCTGCGGCG CTCAGGCCCC CTCGGACCAG CCCGCCGTCG ATGCCCTGGT CCAGATGTAC
GACCAGCGCT CCGGGGTGTG GCCCACCACC GGGTGGTGGA ACAGCGCGAA CGCGGTGAAC
GCGTTGACCA ACTACATGAT CGTCTCGGGC GATCACCGCT ACACCTGGGT CCTGGAGAAC
ACCTTCGCCA AGAAGCGCAA CGCCGCGCGC GGCAACTTCA TCAACGATTT CACCGACGAC
ACCGGTTGGT GGGCCCTGGC CTGGATAAGC GCGTACGACC TGACCGGGAA CGCCGAGTAC
CTACAGACCG CGCGGCGCGC CGTGGACTTC ATGTGGAGCA ATCAGGACGA CACGTGCGGC
GGCGGTTTGT GGTGGACGGT GAATCACGGC TACAAGAATG CGATCTCCAA CGAGCTGTTC
ATCCAGGCCG CGGCCGAGCT GGCGACGCGT CTGGGCGATG CGGGCGCGGC GTACCTCGAC
CGGGCCCGCA CCGTCTGGGA CTGGCTCCAG GCATCCGGGA TGATCAACGA CGACCTGCTG
GTCAACGACG GGCTCAATGC CGCCACCTGC CGCAACAATC GGGACACCAC CTGGACCTAC
AACCAGGGCG TGATCCTGGG CGGTTTGGTC GCGCTGTTCC GGGCCACCGG CGACCACTCG
TACCTGAAGT CGGCCCGCGA ACTGGCCGAC GCCTCCACCC GGGCTCCCGG GCTGCACGTC
GACGGCGTGC TCACCGAACC CTGCGAGCGA ACCGGCTGTG ACGTGAACGG TCCCAGCTTC
AAGGGCATCT ACGTCCGCAA CCTCGGCGAA CTCAACCGCG TCCTGGACGA CCACCCCTAC
AGCGACTACC TGATCGACCA GGCGTCGACC GCCTACGACC ACAACCGCAC CGACGACAAC
GAGTACGGCT TGCACTGGGC CGGGCCGGTT GATCGCGTCA ACGGGGCAAC CCAACAGAGC
GCGGTCGACC TGCTGGTCGC CGCCCAACCG ATCCCGGAGA CCCCCGAGAG CGCCGTCAGC
ACGTCGGGAT AA
 
Protein sequence
MRPGRAARML AVLVAGSLLV GCGAQAPSDQ PAVDALVQMY DQRSGVWPTT GWWNSANAVN 
ALTNYMIVSG DHRYTWVLEN TFAKKRNAAR GNFINDFTDD TGWWALAWIS AYDLTGNAEY
LQTARRAVDF MWSNQDDTCG GGLWWTVNHG YKNAISNELF IQAAAELATR LGDAGAAYLD
RARTVWDWLQ ASGMINDDLL VNDGLNAATC RNNRDTTWTY NQGVILGGLV ALFRATGDHS
YLKSARELAD ASTRAPGLHV DGVLTEPCER TGCDVNGPSF KGIYVRNLGE LNRVLDDHPY
SDYLIDQAST AYDHNRTDDN EYGLHWAGPV DRVNGATQQS AVDLLVAAQP IPETPESAVS
TSG