Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0389 |
Symbol | |
ID | 8445970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 422565 |
End bp | 423656 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645039530 |
Product | glycoside hydrolase family 76 |
Protein accession | YP_003199804 |
Protein GI | 258650648 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4833] Predicted glycosyl hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCCCG GTCGAGCCGC GAGAATGCTG GCCGTGCTAG TGGCCGGCTC GCTGCTGGTC GGCTGCGGCG CTCAGGCCCC CTCGGACCAG CCCGCCGTCG ATGCCCTGGT CCAGATGTAC GACCAGCGCT CCGGGGTGTG GCCCACCACC GGGTGGTGGA ACAGCGCGAA CGCGGTGAAC GCGTTGACCA ACTACATGAT CGTCTCGGGC GATCACCGCT ACACCTGGGT CCTGGAGAAC ACCTTCGCCA AGAAGCGCAA CGCCGCGCGC GGCAACTTCA TCAACGATTT CACCGACGAC ACCGGTTGGT GGGCCCTGGC CTGGATAAGC GCGTACGACC TGACCGGGAA CGCCGAGTAC CTACAGACCG CGCGGCGCGC CGTGGACTTC ATGTGGAGCA ATCAGGACGA CACGTGCGGC GGCGGTTTGT GGTGGACGGT GAATCACGGC TACAAGAATG CGATCTCCAA CGAGCTGTTC ATCCAGGCCG CGGCCGAGCT GGCGACGCGT CTGGGCGATG CGGGCGCGGC GTACCTCGAC CGGGCCCGCA CCGTCTGGGA CTGGCTCCAG GCATCCGGGA TGATCAACGA CGACCTGCTG GTCAACGACG GGCTCAATGC CGCCACCTGC CGCAACAATC GGGACACCAC CTGGACCTAC AACCAGGGCG TGATCCTGGG CGGTTTGGTC GCGCTGTTCC GGGCCACCGG CGACCACTCG TACCTGAAGT CGGCCCGCGA ACTGGCCGAC GCCTCCACCC GGGCTCCCGG GCTGCACGTC GACGGCGTGC TCACCGAACC CTGCGAGCGA ACCGGCTGTG ACGTGAACGG TCCCAGCTTC AAGGGCATCT ACGTCCGCAA CCTCGGCGAA CTCAACCGCG TCCTGGACGA CCACCCCTAC AGCGACTACC TGATCGACCA GGCGTCGACC GCCTACGACC ACAACCGCAC CGACGACAAC GAGTACGGCT TGCACTGGGC CGGGCCGGTT GATCGCGTCA ACGGGGCAAC CCAACAGAGC GCGGTCGACC TGCTGGTCGC CGCCCAACCG ATCCCGGAGA CCCCCGAGAG CGCCGTCAGC ACGTCGGGAT AA
|
Protein sequence | MRPGRAARML AVLVAGSLLV GCGAQAPSDQ PAVDALVQMY DQRSGVWPTT GWWNSANAVN ALTNYMIVSG DHRYTWVLEN TFAKKRNAAR GNFINDFTDD TGWWALAWIS AYDLTGNAEY LQTARRAVDF MWSNQDDTCG GGLWWTVNHG YKNAISNELF IQAAAELATR LGDAGAAYLD RARTVWDWLQ ASGMINDDLL VNDGLNAATC RNNRDTTWTY NQGVILGGLV ALFRATGDHS YLKSARELAD ASTRAPGLHV DGVLTEPCER TGCDVNGPSF KGIYVRNLGE LNRVLDDHPY SDYLIDQAST AYDHNRTDDN EYGLHWAGPV DRVNGATQQS AVDLLVAAQP IPETPESAVS TSG
|
| |