Gene Namu_0375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0375 
Symbol 
ID8445956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp408077 
End bp409222 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content62% 
IMG OID645039518 
Productbeta-lactamase 
Protein accessionYP_003199792 
Protein GI258650636 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCTTC TCGTGGACAC CACCATCAAA GATCAATTGA TCCCCGGAGC GGTCCTTGTG 
CTGAGCACAC CGCAGGGCGA CTTCACCGTC TCCTCCGGCA CCACCGAAAT CGGGGTGCAA
AGCCCGCCGG ACGCGAATAC TCATTTCCGG ATCGCCTCGA ACACCAAGAC GATGACGGCG
GCAGTGGTCC TGCAACTGGC CCAGGAAGGC AAGCTCGAGC TGACCGACCC GGTGTCGAAG
TACGTCTCGG GAGTGCCCGG CGGAGACAGC ATCACCGTCG AGCAGCTGCT GAAGATGCGC
ACCGGGCTGT ACAACTACAC CAACGCCCAG CAGATGGCGA CCAGTCTGGA TGACGACCCC
ACCAGGGAGT GGACACCGCA GGAGCTGCTG GACATCGCCT TCGCCCAGCC CGCCAATTTC
GCCCCCGACG CGGAATTCGA GTACAGCAAC ACCAACTACG TCCTGTTGGG CCTGATCATC
GAGAAGGTCG ACGGTAAACC ACTTGCCACG TCATTCCAGG ACCGGCTGTT CGGGCCGCTG
GGTATGACGA ACACCGAACT ACCTGCCGGC GCGTCATTCA CGATTCCGGA CCCCTTTGCG
CACGGGTACC TCTATGGCAG CTCGTCCATT GCCCTTTTCG GAGAGCCGGC CTACACGCCC
GAACAGATCG CCGCGGCCAA AGATGGCACC CTGCAGCCCA CCGACTACAC CGACGTCAAC
CATTCCTTCG CCTTCGGGGC GGGCAACGTC ATCTCCACCG CCCACGATCT CGTCACCTGG
ACGAAGGCGC TGGTGGGCGG CCAGGTCCTC GACGCCGAAT ACCAGAAGTT GTGGCTCGAC
AGCCCGCAGA TGGAGGACCC CGACAAGCCC GGCGGCCTGT GGTACGGCTA CGGCATCACC
AGGCAGTCCT GGGGATCCAA CAATTTGATC TATCACGGCG GTGAGACCGC CGGCTACAAC
TCGAAGATGG CTGTCGAAAC CACCAACGAC GTGACCCTGG TGCTGTGGAC CACCCTGACC
GTCGACGTGG ACAAGGAGCA GCAGACCGCC AACACGCTGA TGCTCAAAGT CCTGGACCAG
ATCATGGTGC AGTCTCCACT CGCAGTGACC GCAGCTGATC TCACCGCGCC GCCAACCACC
GGATGA
 
Protein sequence
MQLLVDTTIK DQLIPGAVLV LSTPQGDFTV SSGTTEIGVQ SPPDANTHFR IASNTKTMTA 
AVVLQLAQEG KLELTDPVSK YVSGVPGGDS ITVEQLLKMR TGLYNYTNAQ QMATSLDDDP
TREWTPQELL DIAFAQPANF APDAEFEYSN TNYVLLGLII EKVDGKPLAT SFQDRLFGPL
GMTNTELPAG ASFTIPDPFA HGYLYGSSSI ALFGEPAYTP EQIAAAKDGT LQPTDYTDVN
HSFAFGAGNV ISTAHDLVTW TKALVGGQVL DAEYQKLWLD SPQMEDPDKP GGLWYGYGIT
RQSWGSNNLI YHGGETAGYN SKMAVETTND VTLVLWTTLT VDVDKEQQTA NTLMLKVLDQ
IMVQSPLAVT AADLTAPPTT G