Gene Namu_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0346 
Symbol 
ID8445927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp380931 
End bp382031 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content66% 
IMG OID645039491 
Productfatty acid desaturase 
Protein accessionYP_003199765 
Protein GI258650609 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTT TATCCATTCC CCGTGAGCAG CGCGCCGTCT CGGCGGCCGC CCGTCGACCC 
CGACGAGTAC TCACCGACTA CGCCGAGTTG CTGGGCCGGG TGCAGGCCCA GGGCCTGATG
GAGCGCCGGT ACGCCGCCTA CGCGATCAAG GGCGGCCTGC TGCTGGCGGC CTTCGCCGGG
GTGTGGTGCG CCTTCTTCCT GCTCGGCGAA TCCTGGCTGC AGCTCGTCAT CGCCGCTGTC
TTCGGCGTGG TGCTAGCCCA GTTCGGCTTT CTCGGACACG ACGCCGCACA TCGGCAGATC
CTGCGGTCCG GTCCACGCAA CGAAACCCTG GCCCGCGTGG TGGCCGGCCT GTTCTGCGGG
ATGAGTTCGA CCTGGTGGGC GCGCAAGCAC ACGCGACATC ACCTGGCGCC CAATCAGATC
GGCAAGGATC CCGACATCGA TCCGTCGGTG TTGCACTTCT ATCCGACCGA GACGGTGCCT
CGCTCCCGGG TGCTGGCCTT CCTCCGGGCG CATCAGGGTT GGTGGTTCTT CCCGATCCTG
ATGTTCGAGG GATTGCACCT GCACGTCCAG GGGTTCCGGA CCGTGCTGGG CCGCAGCCCG
ATCACCCATC GATGGACCGA GTTGGGATTC ATGGCCGCCC GGATGGGTGG TTACGTCGCG
GTGCTGCTGA TCTTCCTGCC GGTTGGCATG GCCGCAGCGT TCCTGGGCGT GCAGCTGGCC
GTCCTGGGCG TCTATCTCGG CTGCACCTTC GCCCCCAGCC ACAAGGGCAT GCCGATCCTG
CCGCCCGAGG CCAAGATCGA CTTCCTGCGC CGTCAGGTGC TGATGTCGCG CAACATCACC
GGCTCTCACC TGACCACCTT TGCGATGGGT GGCCTGAACT ACCAGATCGA GCACCACCTG
TTCCCGTCGA TGCCCGGCCC GAATCTGCGC CATGCCCGGA CCACGATCCG CGAGTTCTGC
CAGCAGCGTG GGGTCACGTA CACCGAGACC AGCCTGCTCA CGTCCTACGG GATCGTGATC
CGGTACCTCA ATCGGGTCGG CCTGCGAGGC GAACTGGACT CGTTCCAGTG CCCGATCATC
GCCGCCCACC GGCCGATCTG A
 
Protein sequence
MTSLSIPREQ RAVSAAARRP RRVLTDYAEL LGRVQAQGLM ERRYAAYAIK GGLLLAAFAG 
VWCAFFLLGE SWLQLVIAAV FGVVLAQFGF LGHDAAHRQI LRSGPRNETL ARVVAGLFCG
MSSTWWARKH TRHHLAPNQI GKDPDIDPSV LHFYPTETVP RSRVLAFLRA HQGWWFFPIL
MFEGLHLHVQ GFRTVLGRSP ITHRWTELGF MAARMGGYVA VLLIFLPVGM AAAFLGVQLA
VLGVYLGCTF APSHKGMPIL PPEAKIDFLR RQVLMSRNIT GSHLTTFAMG GLNYQIEHHL
FPSMPGPNLR HARTTIREFC QQRGVTYTET SLLTSYGIVI RYLNRVGLRG ELDSFQCPII
AAHRPI