Gene Namu_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0342 
Symbol 
ID8445923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp375585 
End bp377180 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content73% 
IMG OID645039487 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003199761 
Protein GI258650605 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC GCACGGCCGA TGCCGTGGTG ATCGGGGCCG GACCGAACGG CCTGGTCGCG 
GCCATCGCCC TGGCCGACGC CGGCTGGGAC GTGCTGCTGC TGGAGGCCAA CGAGACGGTC
GGCGGCGCCG TGCGCAGCGC CGAGGTCACC GCCCCGGGCT TTTGTTCCGA CATGTTCAGT
GCCTTCTACC CGCTGGCCGC CGCGTCCCGG GTCATCCAGG ACCTGGAACT GGCCCGGCAC
GGGCTGGTGT GGACCCAGGC GGACAAGGTA CTCGCGCACG CGCTCCCGGA CGGCCGGGCC
GCCGTTCTGG AGCGCGATCC CGACCGGACC GCGGCCGGCC TCGAGGAATT CGGCGCCGGT
GACGGCCAGG CCTGGTTGGA GATGTTCGCC GGCTGGCAGC GCATCCGAGA TCCGTTGCTG
GACGCCATGT TCACCCCGAT CCCGCCCATT CGTTCGGGCC TGAAACTGCT CGGCCGGACC
AAGCTGGCCG GGCTGCTGGA CCTGGCCCGG CTGGCCGTGC TGCCAGTCCG CCGGCTCGGT
CAGGAATCCT TCGTCGGCGA CGGTGGCCCG CTGCTGCTGA CCGGCAACGC CATGCACGCC
GACGTCCCCC CGGACGCCGC CGGCAGTGGC ATCTTCGGCT GGTTGCTGAC GATGTTGGGC
CAGGACGTGG GATTCCCGGT GCCGCAGGGG GGCGCGCAGA ACCTGGCCTT CGCCATGGCG
CGACGCTTCG AGTCCGTCGG CGGACAGGTC CGCACCGGGG CACGGGTCAG CTCGGTCCTG
GTCGCCGGCG GTCGGGCGGT CGGGGTGCGG CTCGCCGACG GCACCGCCAT CCGGGCCACC
AAGGCCGTGG TGGCCGACGT CGCCGCGCCC ACCCTGTACC GCGAGCTCGT CGGGCTGGAT
CAGCTGCCGG CCGGGATCGG CGAGGTCCTG GACCGGTTCC AGTGGGACAA CCCCACCCTC
AAGCTCAACT GGGCGTTGGA CCGGCCGGTG GGCTGGCGCG CCCCTGGGGC GGTGGGCGCC
GGCACGGTGC ACCTGGGCAC CGATCTGGAC GGTTTCGTGG ACTTCTCGGC CGATCTGTCC
GTCGGCCGTC CACCCCGGCA TCCGTTCGTC CTGTTCGGCC AGATGACGAC GGCCGACCCC
AGCCGGTCGC CGGCCGGCAC CGAGTCGGCG TGGGCGTACA CCCATGTGCC GCACTCGATG
TCGCAGGACG CAACCCGGCT GGACCAGCAC GTGCAGCGGG TGCAGGAGCA CCTCGAACAG
GTGGCCCCCG GCTTCGGTGA CAGCGTCCGG GCGCGCGTCG TGCAGTATCC GACCGACTTG
CAGGACGCCA ACGCCAACCT GGTCGACGGC GCGGTCAACG GCGGCACGTC CTACCCGCAC
CAGCAGTTGA TCTTCCGGCC GACCCGCGGC CTGGGGCGTC CCGAGACTCC CTTGCCCGGG
CTGTTTCTCG CGTCGGCCTC GGCCCATCCG GGCGGCGGCG TGCACGGCGC CTGCGGCTGG
AACGCCGCCG TCGCGGCCTT GCACTCGCAG GGACCGTGGC GGGCGGCCCG GCGCACGCTG
GCCAGGACCG CCTGGGCTCG GCTGTTGGGC TCCTGA
 
Protein sequence
MTTRTADAVV IGAGPNGLVA AIALADAGWD VLLLEANETV GGAVRSAEVT APGFCSDMFS 
AFYPLAAASR VIQDLELARH GLVWTQADKV LAHALPDGRA AVLERDPDRT AAGLEEFGAG
DGQAWLEMFA GWQRIRDPLL DAMFTPIPPI RSGLKLLGRT KLAGLLDLAR LAVLPVRRLG
QESFVGDGGP LLLTGNAMHA DVPPDAAGSG IFGWLLTMLG QDVGFPVPQG GAQNLAFAMA
RRFESVGGQV RTGARVSSVL VAGGRAVGVR LADGTAIRAT KAVVADVAAP TLYRELVGLD
QLPAGIGEVL DRFQWDNPTL KLNWALDRPV GWRAPGAVGA GTVHLGTDLD GFVDFSADLS
VGRPPRHPFV LFGQMTTADP SRSPAGTESA WAYTHVPHSM SQDATRLDQH VQRVQEHLEQ
VAPGFGDSVR ARVVQYPTDL QDANANLVDG AVNGGTSYPH QQLIFRPTRG LGRPETPLPG
LFLASASAHP GGGVHGACGW NAAVAALHSQ GPWRAARRTL ARTAWARLLG S