Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0342 |
Symbol | |
ID | 8445923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 375585 |
End bp | 377180 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645039487 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003199761 |
Protein GI | 258650605 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC GCACGGCCGA TGCCGTGGTG ATCGGGGCCG GACCGAACGG CCTGGTCGCG GCCATCGCCC TGGCCGACGC CGGCTGGGAC GTGCTGCTGC TGGAGGCCAA CGAGACGGTC GGCGGCGCCG TGCGCAGCGC CGAGGTCACC GCCCCGGGCT TTTGTTCCGA CATGTTCAGT GCCTTCTACC CGCTGGCCGC CGCGTCCCGG GTCATCCAGG ACCTGGAACT GGCCCGGCAC GGGCTGGTGT GGACCCAGGC GGACAAGGTA CTCGCGCACG CGCTCCCGGA CGGCCGGGCC GCCGTTCTGG AGCGCGATCC CGACCGGACC GCGGCCGGCC TCGAGGAATT CGGCGCCGGT GACGGCCAGG CCTGGTTGGA GATGTTCGCC GGCTGGCAGC GCATCCGAGA TCCGTTGCTG GACGCCATGT TCACCCCGAT CCCGCCCATT CGTTCGGGCC TGAAACTGCT CGGCCGGACC AAGCTGGCCG GGCTGCTGGA CCTGGCCCGG CTGGCCGTGC TGCCAGTCCG CCGGCTCGGT CAGGAATCCT TCGTCGGCGA CGGTGGCCCG CTGCTGCTGA CCGGCAACGC CATGCACGCC GACGTCCCCC CGGACGCCGC CGGCAGTGGC ATCTTCGGCT GGTTGCTGAC GATGTTGGGC CAGGACGTGG GATTCCCGGT GCCGCAGGGG GGCGCGCAGA ACCTGGCCTT CGCCATGGCG CGACGCTTCG AGTCCGTCGG CGGACAGGTC CGCACCGGGG CACGGGTCAG CTCGGTCCTG GTCGCCGGCG GTCGGGCGGT CGGGGTGCGG CTCGCCGACG GCACCGCCAT CCGGGCCACC AAGGCCGTGG TGGCCGACGT CGCCGCGCCC ACCCTGTACC GCGAGCTCGT CGGGCTGGAT CAGCTGCCGG CCGGGATCGG CGAGGTCCTG GACCGGTTCC AGTGGGACAA CCCCACCCTC AAGCTCAACT GGGCGTTGGA CCGGCCGGTG GGCTGGCGCG CCCCTGGGGC GGTGGGCGCC GGCACGGTGC ACCTGGGCAC CGATCTGGAC GGTTTCGTGG ACTTCTCGGC CGATCTGTCC GTCGGCCGTC CACCCCGGCA TCCGTTCGTC CTGTTCGGCC AGATGACGAC GGCCGACCCC AGCCGGTCGC CGGCCGGCAC CGAGTCGGCG TGGGCGTACA CCCATGTGCC GCACTCGATG TCGCAGGACG CAACCCGGCT GGACCAGCAC GTGCAGCGGG TGCAGGAGCA CCTCGAACAG GTGGCCCCCG GCTTCGGTGA CAGCGTCCGG GCGCGCGTCG TGCAGTATCC GACCGACTTG CAGGACGCCA ACGCCAACCT GGTCGACGGC GCGGTCAACG GCGGCACGTC CTACCCGCAC CAGCAGTTGA TCTTCCGGCC GACCCGCGGC CTGGGGCGTC CCGAGACTCC CTTGCCCGGG CTGTTTCTCG CGTCGGCCTC GGCCCATCCG GGCGGCGGCG TGCACGGCGC CTGCGGCTGG AACGCCGCCG TCGCGGCCTT GCACTCGCAG GGACCGTGGC GGGCGGCCCG GCGCACGCTG GCCAGGACCG CCTGGGCTCG GCTGTTGGGC TCCTGA
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Protein sequence | MTTRTADAVV IGAGPNGLVA AIALADAGWD VLLLEANETV GGAVRSAEVT APGFCSDMFS AFYPLAAASR VIQDLELARH GLVWTQADKV LAHALPDGRA AVLERDPDRT AAGLEEFGAG DGQAWLEMFA GWQRIRDPLL DAMFTPIPPI RSGLKLLGRT KLAGLLDLAR LAVLPVRRLG QESFVGDGGP LLLTGNAMHA DVPPDAAGSG IFGWLLTMLG QDVGFPVPQG GAQNLAFAMA RRFESVGGQV RTGARVSSVL VAGGRAVGVR LADGTAIRAT KAVVADVAAP TLYRELVGLD QLPAGIGEVL DRFQWDNPTL KLNWALDRPV GWRAPGAVGA GTVHLGTDLD GFVDFSADLS VGRPPRHPFV LFGQMTTADP SRSPAGTESA WAYTHVPHSM SQDATRLDQH VQRVQEHLEQ VAPGFGDSVR ARVVQYPTDL QDANANLVDG AVNGGTSYPH QQLIFRPTRG LGRPETPLPG LFLASASAHP GGGVHGACGW NAAVAALHSQ GPWRAARRTL ARTAWARLLG S
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