Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0281 |
Symbol | |
ID | 8445861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 312453 |
End bp | 315296 |
Gene Length | 2844 bp |
Protein Length | 947 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645039425 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003199700 |
Protein GI | 258650544 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGGC GGGCCAGCGG CGACGGCGGT CCGTCGGCGG GCACCCTGTT GGAACGGGCC GGAGAGATCT CGGCGATCGC GGACGCGTTC GGAGCGGCCG CCGACGGCGA GGGCCGGGTC GTGGTGGTGG CCGGCCGGGC CGGGATCGGC AAGTCGAGCC TGCTGGCCGA GAGCCAACGA GCGGCCCGGG CCGGCGGGTT CTCGGTGCTG ACCGCCCGGG CCAGCGACCT GGAGCGGGAG TTCGCCTTCG GGGTGGCGCG GCAGCTGTTC GAACGGGCCG TGCGGCGGTC GCCGCAGTGG TGGGCCGGCG CCGCCGACCA GGCCCGGGCG GTGTTCGACG AGGTCCCGGC GGCCCCCGGC GGGATCTTCG AGGACGTGTC GCAGTCGGTG CTGCACGGCC TGTACTGGCT GGTCGTCAAC GCCAGCGCCG ACGGGCCGTT GCTGCTGACC GTGGACGATC TGCAGCTGTG CGACCGCTCG TCCCTGCGGT TCCTGTCCTA CCTGAGCCGG CGGTTGGACG GGTTGCCGGT GGTCGTCGTG GCCGGCTACC GGACGGCGGG CCAACCACCG GCCGACGCCG CCCTCGACGA GCTGGTCGGG GACCCGGCCA CCCAGCTCGT GCAGCCCCAG CCGCTGACGC TGGAGGCGGT GACGGAGGTG CTGCGTCGGC GGATGGGCAC CTACCCGGCG CCGGAGTTCG CCGCCGACTG CCGCCGGGTG ACCGGCGGCA ACCCCCTGCT GCTGGACGAG CTGGCCCGCG CCCTGCAGGC CGACGGGGTC CGCCCGGACG CCGCCTCGGT CGCGGCGATC GCCACGCTCG GACCGCGGGC GGTCTCCCGC ACCGTGCTGG CCCGGCTGGC CCACGCCGGG CCACAGGCCA TCGCCGTGGC GCAGGCGCTG GCGGTGATCG GCGATTGGGA GGGCGTGGCC ATGGTGGAGG CCGTCACCGG CCTGGACGCC GACGAGATCG AGGCGGCGAC CCGGACCTTG CTGCGCGCCG AGATCCTGCA GCCCGGTTCA CCGTTGCGGT TCGTGCACCC TCTGGTGCGC GATGCCGTCT ACCGCGAACT GACGCCCGTC GAATCCGAAC GACGGCATCT GCGAGTGGCC GATGTGCTGC GGACGATGGG GCGCCCCGAC GAGCAGATCG CCGCCCACGC GTTGGCCCTG CAGCCGGCCG GCCGGGAGTG GGTGGTGACG GTGCTGCGGG CGGCCGCGCT GATCGCGGTC CACCGCGGCG CGGCCGACGA CGCGTTGGCC TACCTGCGGC GCGCGGTGAT CGAGCCCGCC CCCGACGATG TCCGGCCGCG GCTGCTGCAG GAACTGGGCA TGTCCGAATC GCTGGCCAAC GAACCGGTGT CGGCCATCGA GCACCTGCGC GCGGCCTACC AGCTCGCGTC CGCGCCGGCC GACCGCGGCG AGATCGTCGG CGTGCTGTCC CGAATGTTGA TCTTCACCAA CCCACCGGGA GAGGCCGTCG AGCTGCTGCG CCAGGCCCGG GCGACACTGC CGGCCGACTT CGGCGATCTG CACGATGCAC TGGTCGCGGT CGAGCTGTAT GCGGGGCACT TCGGAGCCGA CGACGCGGAC GCCGGGGAGC GATTGTCACT GGTGCGGGTG CCGGGTCCGG GGTCCGGGCC GGGCGCGCGG ATGCTGGCCG CGACCGCGGC CTGGGACCGG GCCCTGACCG GGGCCCCGAT GGCCGGCTGC GTGGCCTTGG CCCGAGCCGC CCTGGACGAC GGGGTGCTGG TCCGGGCCGA CCCGTGGTTC ATGTCGATCG TGGCCGCCGG CGTGCTGGTG CTGGCCGACG AGGCCGGTGC GGCCGACGTC TGGGCGCGGA TGCTCGCCGA CGGGCTTCGC AACGGCTCGC AGCTGACCGT CAGCGGGGTT CGGCTGTGGC AGGGCTGGAA CTTCCTGGAA TGGGGCGCGC TGGACGAGGC CGCGCACGCC CTGGGGCAGT ACGAGACCGA CACGATCCGG CGCGGCGGGC AGCACGAGAG CGGCATGGCC TACTGGGCCG GGTTCCACAC CCGGCTGCTG GTCGACCGGG GTGACCTGGC CGGCGCACGG GCCGCCTGGG GGCGGGCCGC GCCGGCCGCG CCCGGGTCGG ACGGGGACCT GCTGCTGCGC CGGGCCGAGC TGGAGGTGCT GCTCGCCGAG GGCCAGTGGC AGCAGGCGCT GGAGGCCGCC GACCGGTTGG ATGCGGTCCG CCGGCGGGTG GTGAATCCGG CCTGGGTGCC GGTCGCCGGT CTTCGGGCCC GCGCGCTGGC CGGGCTGCAG CGGTGGTCCG AGGCGACCGC GGCGGCCGAA TCCGGAGTGA GCGCCGCGCG GCAATGGGGT GCGCCCCGCA CGGTCGGGTC CGCCCTGCGG GTGCTGGCCG GCGTGCTCGA CGCCGCCGGA TCCGACTCCT GCCTCCCGGT CTTCGACCAG GCCGTCGGCG CGCTGGCGGA CTCGCCCGCC CGGTTGGAAC TGGCCCGGGC CGAGGCCGGT CTGGGCGGGG CCCTGCGCCG CCGCGGCCAG GCGGTGGCCG CCCGCCCGCA CCTGGCCCGG GCGGTCGAGC TGGCCACCGC GTGTGGGGCC GACTCCGTGG CGGGCCCGGC CGCGGCCGAA CTGCGGGTTG CCGGCGGCCG TCCGCGGCAG CGGGCGCTCA CCGGGATCGA GGCCCTGACC CCGAGTGAAC GCCGCGCCGT CGAGCTGGCC GCCGCCGGCC GGACCAACAA GGCCATCGCC CAGGAGCTCT TCGTCACGCC CAAGACGGTC GAGGTGCATC TGTCCAGCGC CTACCGCAAG CTCGGCGTCA CCTCGCGCGG CGAGCTGGCG GCGTTGTGGG CGCGGGTCGG CTGA
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Protein sequence | MTGRASGDGG PSAGTLLERA GEISAIADAF GAAADGEGRV VVVAGRAGIG KSSLLAESQR AARAGGFSVL TARASDLERE FAFGVARQLF ERAVRRSPQW WAGAADQARA VFDEVPAAPG GIFEDVSQSV LHGLYWLVVN ASADGPLLLT VDDLQLCDRS SLRFLSYLSR RLDGLPVVVV AGYRTAGQPP ADAALDELVG DPATQLVQPQ PLTLEAVTEV LRRRMGTYPA PEFAADCRRV TGGNPLLLDE LARALQADGV RPDAASVAAI ATLGPRAVSR TVLARLAHAG PQAIAVAQAL AVIGDWEGVA MVEAVTGLDA DEIEAATRTL LRAEILQPGS PLRFVHPLVR DAVYRELTPV ESERRHLRVA DVLRTMGRPD EQIAAHALAL QPAGREWVVT VLRAAALIAV HRGAADDALA YLRRAVIEPA PDDVRPRLLQ ELGMSESLAN EPVSAIEHLR AAYQLASAPA DRGEIVGVLS RMLIFTNPPG EAVELLRQAR ATLPADFGDL HDALVAVELY AGHFGADDAD AGERLSLVRV PGPGSGPGAR MLAATAAWDR ALTGAPMAGC VALARAALDD GVLVRADPWF MSIVAAGVLV LADEAGAADV WARMLADGLR NGSQLTVSGV RLWQGWNFLE WGALDEAAHA LGQYETDTIR RGGQHESGMA YWAGFHTRLL VDRGDLAGAR AAWGRAAPAA PGSDGDLLLR RAELEVLLAE GQWQQALEAA DRLDAVRRRV VNPAWVPVAG LRARALAGLQ RWSEATAAAE SGVSAARQWG APRTVGSALR VLAGVLDAAG SDSCLPVFDQ AVGALADSPA RLELARAEAG LGGALRRRGQ AVAARPHLAR AVELATACGA DSVAGPAAAE LRVAGGRPRQ RALTGIEALT PSERRAVELA AAGRTNKAIA QELFVTPKTV EVHLSSAYRK LGVTSRGELA ALWARVG
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