Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0261 |
Symbol | |
ID | 8445841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 292976 |
End bp | 295453 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645039405 |
Product | xanthine permease |
Protein accession | YP_003199680 |
Protein GI | 258650524 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03164] OHCU decarboxylase [TIGR03173] xanthine permease [TIGR03180] OHCU decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATCTG CACCGACGGC GAGCACGCCC GCCCGCACCA AGTCCGTCAA ACACCCGGTG GACCAGGTCC TGCCGATTCC CAAGCTGGCC GTCTACGGCA TCCAGCACGT GCTGGCGTTC TACGCCGGTG CGGTGGTGGT CCCGATCCTG CTGGCCAGCG CGATCGGCCT GACCACCGAA GAACTGATCC ACCTGATCAA CGCGGACCTG TTCACCTGCG GTATCGCCTC GATCATCCAG TCCGTCGGGT TCTGGAAGAT CGGCGTGCGG CTGCCCCTGC TGCAGGGGGT GACCTTCACC GCGGTCTCGC CGATGATCGC GATCGCCATG GCCGCCGGCG GCGGCACCGA GGGCCTGCTC TACATCTACG GCGCGGTCAT CATCGCCGGG CTGTTCACCT TCTTCATGGC GCCCTACTTC GCCAGGCTGA TCCGGTTCTT CCCGCCGGTG GTGACCGGCA CCGTGATCAC CATCATCGGC ATCGCCCTGC TGCCGGTGGC CGCCCTGGAC GCGGTGGGCG GCGGGGCCAA CCCCGACCCG ACCAGCACCA AGAACCTGGC CTACGCCCTG GGCACGCTGT TCGTCATCGT GCTGATCCAG CGGATCTTCA AGGGCTTCCT GGCCACCGTG GCCGTGCTGG CCGGTCTGGT CATCGGCACC GCGGTCGCGT TCTTCCTCGG CGACGCCAGC TTCAGCAGCC TGTCCGAGTC CGCCTGGTTC GGCGTCACCA CCCCGTTCTA CTTCGGCATT CCGAAGTTCT CGGCGGCCGC CATCATCTCG ATGATCGTGG TCATGCTGAT CACCGCGGTG GAGACCACCG GTGACGTCTT CGCCACCGGC GAGATCGTGG AGAAGCGGGT CGGCGGCGAG GACGTCGCCC GGGCCCTGCG CGCGGACGGA CTGGCCACCT TCATCGGCGG CGTGCTGAAC TCGTTCCCCT ACACCTGTTT CGCCGAGAAC GTCGGCCTGG TCCGGCTGAC CCGGGTCAAG AGCCGTTACG TGGTGGCCGC CGCCGGCGTC TTCATGATCC TGATCGGCAT GATCCCCAAG GCCGGCGCGC TGGTGGCCAG CATCCCGCCG CCGGTGCTGG GCGGCGCGGC GATCGCCATG TTCGCCACCG TCGCGGTGGT CGGTATCCAG ACCCTGTCCC GGGTCGACTT CCACGACCAC CGCAACGTGG TCATCGTCGG CACCAGCATC GGCCTGGCCA TGTTCGTCAC CGTCCAGCCG GACGTGGCCA AGGCCGTGCC GGAGTGGGCG CAGATCATCT TCGGCTCCGG CATCACCCTG GGCAGCCTGA CCGCCATCAT CCTGAACCTG GTGTTCCACC ACCTGGACAA GGGCTACGGC CCGGCCGTCG CCGGCTCGCC CAAGGGTGGG GTCATCCGCC TGGAGCAGGT CAACAACATG TCCCGCGAGG AGTTCGTGGC CACCTTCGGC CGGCTGTTCC AGGGCCCGTC CTGGGTGGTC GAGCGCGCCT ACGACCACCG CCCGTTCGCC GACACCCCGG CCCTGCGGGC CGCGTTCCAG GACGCGTTGT TCACCGCGAA CAGCACCGAG CAGCGGGACC TGCTGTCCTT CTACCCGGAC CTGGGCAGCG ACGCCGGGCC CGACATGTCC GAGGAGTCCA AGAAGGACCG CGCGGCGGCC GGCCTGATGT TGCTCAACGA CGATGACCAC GAGCAGTTCT CGCACCTGAC CTCGGCCTAC CGCGAGCGGT TCGGCATCCC GCTGATCATG TCGGTGCGGG ACGTGGAGAA GCGGGACCAG ATCCTCAAGT CCGGCTGGGA GCGGCTGCAG AACTCGCCCA CCCAGGAGCA GGCCACCGCG GTCATCGAGG TCGCCAAGAT CGCCAACCAC CGCTTCGACG ACCTGGTCGC CGACGCCAGC CCGCTGCTGC TGCCCCGGGC CACCTTCCTG GAGGAGGTCG ACAACCTGTC GACCCCGCCG TCCGCCCGCC AGGAGTCGGT CGACGAGGAG TTCGCCGCCG GCACCACCCG GTTCAACGCG ATGGGACAGG ACGAGGTGCG GCAGGTGCTG GCGAGCTGCC TGGACGTTCC CCGGTGGATC GACGCGGTGG CCGCCGGCCG GCCCTACCCG TCGGCCCAGC ACGTGCTGCA CACGGCCCGG GTCGCGGCGT CGGACTTCTC CGACGAGGAG CTGCGGGCGG CGTTGGCCAA GCATCCCCGG ATCGGGGAGA GGGCCGGCGC CGGGCACGAT GTCGAGTTCT CCCAGCGGGA GCAGTCGGCC GTCGGAACGG CCGATGCCGC GGTCCAGCAG GCGATCCTGG CCGGCAATGC GGACTACGAG AACAAGTTCG ACCGGGTGTT CCTGATCCGG GCGGCCGGCC GGTCGGCCCC GGAGATCCTG GCCGAGCTGC AGCGCCGGCT GGGCAACTCG CCGGAGCAGG AACGGGCCGA GGTCGTCACC CAGCTCCGGG AGATCGCCCT GACCCGGCTG GAAACCGTCC TGGCCTGA
|
Protein sequence | MASAPTASTP ARTKSVKHPV DQVLPIPKLA VYGIQHVLAF YAGAVVVPIL LASAIGLTTE ELIHLINADL FTCGIASIIQ SVGFWKIGVR LPLLQGVTFT AVSPMIAIAM AAGGGTEGLL YIYGAVIIAG LFTFFMAPYF ARLIRFFPPV VTGTVITIIG IALLPVAALD AVGGGANPDP TSTKNLAYAL GTLFVIVLIQ RIFKGFLATV AVLAGLVIGT AVAFFLGDAS FSSLSESAWF GVTTPFYFGI PKFSAAAIIS MIVVMLITAV ETTGDVFATG EIVEKRVGGE DVARALRADG LATFIGGVLN SFPYTCFAEN VGLVRLTRVK SRYVVAAAGV FMILIGMIPK AGALVASIPP PVLGGAAIAM FATVAVVGIQ TLSRVDFHDH RNVVIVGTSI GLAMFVTVQP DVAKAVPEWA QIIFGSGITL GSLTAIILNL VFHHLDKGYG PAVAGSPKGG VIRLEQVNNM SREEFVATFG RLFQGPSWVV ERAYDHRPFA DTPALRAAFQ DALFTANSTE QRDLLSFYPD LGSDAGPDMS EESKKDRAAA GLMLLNDDDH EQFSHLTSAY RERFGIPLIM SVRDVEKRDQ ILKSGWERLQ NSPTQEQATA VIEVAKIANH RFDDLVADAS PLLLPRATFL EEVDNLSTPP SARQESVDEE FAAGTTRFNA MGQDEVRQVL ASCLDVPRWI DAVAAGRPYP SAQHVLHTAR VAASDFSDEE LRAALAKHPR IGERAGAGHD VEFSQREQSA VGTADAAVQQ AILAGNADYE NKFDRVFLIR AAGRSAPEIL AELQRRLGNS PEQERAEVVT QLREIALTRL ETVLA
|
| |