Gene Namu_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0244 
Symbol 
ID8445824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp272563 
End bp274368 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content68% 
IMG OID645039388 
Productglyoxylate carboligase 
Protein accessionYP_003199663 
Protein GI258650507 
COG category[R] General function prediction only 
COG ID[COG3960] Glyoxylate carboligase 
TIGRFAM ID[TIGR01504] glyoxylate carboligase 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCA TGCGTGCCGT CGATGCCGCC GTCGCCATCC TGGAGAAGGA AGGCGTCGAC 
ACCCTGTTCG GGCTGCCCGG CGCAGCCATC AACCCGTTCT ACTCCGCCCT GCGCAAGCAC
GGCGGGATGA AGCACATCCT GGCCCGCCAC GTCGAGGGCG CCTCGCACAT GGCCGAGGGG
TACACCCGGG CCAAGGCCGG CAACATCGGG GTGTGCGTCG GCACGTCCGG CCCGGCCGGC
ACCGACATGA TCACCGGCCT GTACTCGGCC TCGGCCGACT CGATCCCGAT CCTGTGCATC
ACCGGTCAGG CCCCGGTCGC CCGCCTGCAC AAGGAGGACT TCCAGGCGAT CAACATCGCC
GACATCGCCA AGCCGCTGAC CAAGATGGCG ATGACCGTGC TGGAGCCGGC CCAGGTGCCC
GGCGCCTTCC AGCAGGCGTT CCACCTGATG CGTTCCGGAC GCCCCGGCCC GGTGCTGATC
GACCTGCCGT TCGACGTGCA GATGGCGCAG ATCGAGTTCG ACCCGGACAC CTACGAGCCG
CTGCCGATCT ACCGGCCGCG GGCGACGAAG GCCCAGGCGG CCAAGGCGCT GGACATGCTG
GCCGCCAGCG AGCGCCCGGT GATCGTGGCC GGTGGCGGCA TCATCAACGC CGACGCCAGC
GACCTGCTGG TCGAGCTGGC CGAACTGCTG GACGTGCCGG TCATCCCGAC GCTGATGGGC
TGGGGCACCA TCCCCGACGA CCACCGGCTG ATGGCCGGCA TGGCCGGGCT GCAAACCTCG
CACCAGTACG GCAACGCCAC CATCCTGGCC TCGGACTTCG TCTTCGGCAT CGGCAACCGG
TGGGCCAACC GGCACACCGG CGGGCTGGAC ACCTACCGGG CCGGCCGCAC CTTCGTGCAC
GTGGACATCG AGCCGACGCA GATCGGCCGG GTGTTCGCGC CCGACTACGG CATCGTCTCC
GACGCCGGCG CGGCGCTGGA GCAGCTGGTC GCGATCGCAC GCGAGCGCAA GGCCGCCGGC
GAGCTGGCCG ACCGTTCCCA GTGGGTGGCC GACTGCCAGG AGCGCAAGCG CACCCTGCAC
CGGCGCACCC ACTTCGAGAA CATCCCGATC AAACCGCAGC GGGTGTACGA GGAGATGAAC
AAGGCGTTCG GGCCGGACAC CCGGTACGTC TCCACCATCG GCCTGTCCCA GATCGCGGCG
GCCCAGTTCC TGCATGTGTA CAAGCCGCGG CACTGGATCA ACGCCGGCCA GGCCGGTCCG
TTGGGCTGGA CCCTGCCGGC CACCCTGGGC GTGTGCGTCG CCGACCCGGA CGCCACCGTG
GTCGCGCTGT CCGGCGACTA CGACTTCCAG TTCATGATGG AGGAGCTGGC CGTCGGCGCC
CAGTTCAACC TGCCGTACAT CCACGTGCTG GTGAACAACG CCTACCTGGG CCTGATCCGG
CAATCCCAGC GCGGCTTCGA GATGGACTAC CACGTGCAGC TCTCGTTCGA CAACATCAAC
ACCGAGAGCA CCGCCGACGA CGGCACCGAC AACCCGATCA AGGGCTACGG CGTCGATCAC
GTCAAGCTGG CCGAAGCCAT GGGGGCCAAG GCGATTCGGG TGCATGATCC CGAGGAGCTG
CTACCGGCCC TGGAAACCGC GAAGAAGATG CTGGTCGAGC ACCGGGTGCC GGTCGTGGTC
GAGGTCGTGC TGGAGCGGGT CACCAACATC TCGATGGGCG TGGAGATCGA CAACGTCGTC
GAGTTCGAGG AGCTGGCCCT GACCTCCGCG GACGCACCGA CCGCGATCAT CTCGATGCTG
GACTGA
 
Protein sequence
MPTMRAVDAA VAILEKEGVD TLFGLPGAAI NPFYSALRKH GGMKHILARH VEGASHMAEG 
YTRAKAGNIG VCVGTSGPAG TDMITGLYSA SADSIPILCI TGQAPVARLH KEDFQAINIA
DIAKPLTKMA MTVLEPAQVP GAFQQAFHLM RSGRPGPVLI DLPFDVQMAQ IEFDPDTYEP
LPIYRPRATK AQAAKALDML AASERPVIVA GGGIINADAS DLLVELAELL DVPVIPTLMG
WGTIPDDHRL MAGMAGLQTS HQYGNATILA SDFVFGIGNR WANRHTGGLD TYRAGRTFVH
VDIEPTQIGR VFAPDYGIVS DAGAALEQLV AIARERKAAG ELADRSQWVA DCQERKRTLH
RRTHFENIPI KPQRVYEEMN KAFGPDTRYV STIGLSQIAA AQFLHVYKPR HWINAGQAGP
LGWTLPATLG VCVADPDATV VALSGDYDFQ FMMEELAVGA QFNLPYIHVL VNNAYLGLIR
QSQRGFEMDY HVQLSFDNIN TESTADDGTD NPIKGYGVDH VKLAEAMGAK AIRVHDPEEL
LPALETAKKM LVEHRVPVVV EVVLERVTNI SMGVEIDNVV EFEELALTSA DAPTAIISML
D