Gene Namu_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0209 
Symbol 
ID8445789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp237597 
End bp238625 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content73% 
IMG OID645039356 
Productesterase, PHB depolymerase family 
Protein accessionYP_003199631 
Protein GI258650475 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCT TTCGGCTGGG TACCCGCCGG GTCGAGGGAT CGGTCGGCGA GCAGGGCAGT 
GCTCCAGGTC TGATCGATCC GCCGGCGCAG CGGGGTCAGG CCCAGGGTCA GCGCGAACGC
CGCACCTTCA CCGGCCCGGA CGGGTCCCGC GCCTACAGCC TGTACGTCCC CCCGGCCTTA
GGGGCATCAG CGGCATCAGC GGCGGCGGCA TCAGCGGCGG CGGCAGCGGC CCGAGCCGGC
GGCCCGTGGC CGCTGGTGGT CATGCTGCAC GGCGGCGCGC AGACCGCCGC CGATTTCGCG
GTCGGCACGG ACATGGATTG CCTGGCCGAC CACTACGGCT TCGTGGTGGC CTACCCGGAG
CAGTCCACGC AGGCGAACCC GGGCGGCTAC TGGAACTGGT TCCGGCCGCA GGACCAGCAG
GCCGGGGCCG GCGAACCGGG GATCCTGGCC GGCATCGTCG CCGAGGTGAT GGCGCAGCTG
CCGATCGATC CGGGCGCGGT GTTCGTCGCC GGATTGTCGG CCGGCGGAGC CATGGCGGCC
GTGATGGCCG CGGCGCATCC GGAGCTGTTC ACCGCGGTCG GCGTGCACTC GGAGGTGGGT
TACCGGGCCG CGGCCGATGC CGGGTCCGCG TTCGGCGTGA TGCAGAGCGG GGGCGCTCCG
GACACCCACG GCCCCGTCCC GATGATCGTG TTCCACGGCA CCCGGGACAG CACCGTGGCC
GCGGTCAACG CGCACCAGGT GGTGCAGGCC GCGCTGGCCG GCGACCACAC CGGGTTGCAG
GAGACGATCG ACGTCGTCCC CGCCGAGGAC GGGCGCCGCG GGTACACCCG GACCGTCCAT
CGGGATGCCG CCGGTCGCAC CATGGTCGAG TCCTGGCTGG TGGAAGGTGG TGGTCACGCC
TGGTTCGGTG GCCAACCGGC CGGCAGCTAC ACCGATCCGG CCGGGCCGGA CGCCTCGGTG
GAGCTGGTCC GGTTCTTCCT GAGCCACCGA GACCGTCATC GGGCCGGTCA CCGCGGGGCC
GGTTCCTGA
 
Protein sequence
MTFFRLGTRR VEGSVGEQGS APGLIDPPAQ RGQAQGQRER RTFTGPDGSR AYSLYVPPAL 
GASAASAAAA SAAAAAARAG GPWPLVVMLH GGAQTAADFA VGTDMDCLAD HYGFVVAYPE
QSTQANPGGY WNWFRPQDQQ AGAGEPGILA GIVAEVMAQL PIDPGAVFVA GLSAGGAMAA
VMAAAHPELF TAVGVHSEVG YRAAADAGSA FGVMQSGGAP DTHGPVPMIV FHGTRDSTVA
AVNAHQVVQA ALAGDHTGLQ ETIDVVPAED GRRGYTRTVH RDAAGRTMVE SWLVEGGGHA
WFGGQPAGSY TDPAGPDASV ELVRFFLSHR DRHRAGHRGA GS