| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0193 |
|---|
| Symbol | |
|---|
| ID | 8445773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 218703 |
|---|
| End bp | 220055 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645039340 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_003199615 |
|---|
| Protein GI | 258650459 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC ACAATCCGAT GACGGCGCCG CTGCGCCGGA TACCGGTCCG TTTCCGCTGG
TGGTTGGCCG GCTGCCTGGT CGCGCTGGTC GCGGCGTTCT CCTTGCTGCA CGCCTTCGCC
CCCGGACCGG ATGTCCCGGA GATCATGCGC CAACCCGGGG CGCTGCTGCT GCTGGCCCTG
ATCGTGCTGG CCGACCTGCA TCCTGCGCTG CCGTGGATGC GGTCCACCAA CCCGTTCGAC
GAGTTCATCT TCTCCACTCC GCTGGCCATC GCCGCGCTGC TGGTGTTCGG GCCGCACGCC
GCGATCATGT TCGTGATCGC CGGGTTCGCC ATGACCGTGG CCCTGGGCAT GCGTTGGTGG
CGGGTGGTGC TCAACGCGGC GCTCTGGGGA GTGCAGGGCG CCGCGGCCGC CGGCGTCCTG
GCCGTGGTGT GGGCCGCCGC GGGCTGGGAC AACGAGGTGC CGGCCGAGGC GATGATCCCG
ATGACGATCG TGCTGGCCGT GATCATCGAG GGGCTCAACA TCGCCCTGGT GATGACCTCG
CAGTGCCTGG CCGGGGCGAC CACGCCCCGG GCGTACCTGG CCGACTGGCG CAGCCAGGTC
GCCATCGGCA CGCTGGATCT CACGGCGCCC ATTCCCGCGG CGCTGGCGGC CGCTCAGCCG
GCCCTGCTGC CGCTGCTGGC GGTGGCCATG GTGGCCGCGC AGGCGGGCCT GAGCGCGGTG
ACGTCGCGGA CGGCCCAGGC CGGCACCGAC CCATTGACCT CGGTGCCCAA CCGCGCCTAC
CTGCTGGCCC GGATCAAGTC CCGGCTGGCC GGGACCGAGG ATGCCCGCGA CCCGGTCACC
GTGCTGCTCG TCGACTTGGA CCGGTTCAAG CAGATCAACG ACGAGCTCGG CCACCTGGTC
GGTGACCGGG TCCTGGTCGA GGTCGCCCGC CGGCTGGAGG AGTCCACCCG GTCCAGCGAC
GTCGTCGCCC GGTTCGGCGG CGACGAGTTC GCGGTGCTGC TCTCCGGCGG GTCCGGGCAG
CGCAACGCGC AGGAGGTGGC GGCGCGGATC CGGACCGCGG TCGCCCGGCC GATCCACCTC
GACGGGCGGT CGGTCCAGGT CGGAGTCACC ATCGGCTGGG CGCTGGCCGA GGGGCACGAC
ACCGATCCGT TGGCACTGCT GCACCGGGCC GACGCCCGCC TGTACGCGGC GAAGGCGGCT
CGCAGTCCCG CGCCGGCACC GCTCGCCGAG CCGCTCCCGG CCCGCCCTGA GGCGTCGCCG
GTCACCGACT TCCGTGGACC GATCTGGTCC GGTACATCGG TGCGCTCGTC CCAGGCGCAT
GATGGGGATG CGTCGGCGGC CACCGCTTCG TGA
|
|---|
| Protein sequence | MTEHNPMTAP LRRIPVRFRW WLAGCLVALV AAFSLLHAFA PGPDVPEIMR QPGALLLLAL
IVLADLHPAL PWMRSTNPFD EFIFSTPLAI AALLVFGPHA AIMFVIAGFA MTVALGMRWW
RVVLNAALWG VQGAAAAGVL AVVWAAAGWD NEVPAEAMIP MTIVLAVIIE GLNIALVMTS
QCLAGATTPR AYLADWRSQV AIGTLDLTAP IPAALAAAQP ALLPLLAVAM VAAQAGLSAV
TSRTAQAGTD PLTSVPNRAY LLARIKSRLA GTEDARDPVT VLLVDLDRFK QINDELGHLV
GDRVLVEVAR RLEESTRSSD VVARFGGDEF AVLLSGGSGQ RNAQEVAARI RTAVARPIHL
DGRSVQVGVT IGWALAEGHD TDPLALLHRA DARLYAAKAA RSPAPAPLAE PLPARPEASP
VTDFRGPIWS GTSVRSSQAH DGDASAATAS
|
|---|
| |