| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0187 |
|---|
| Symbol | |
|---|
| ID | 8445767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 209480 |
|---|
| End bp | 211807 |
|---|
| Gene Length | 2328 bp |
|---|
| Protein Length | 775 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645039334 |
|---|
| Product | alpha-xylosidase YicI |
|---|
| Protein accession | YP_003199609 |
|---|
| Protein GI | 258650453 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTCA GCGACGGCTA CTGGATGGTG CGCGAGGGCT TCCAGGTCCG CACCGCCCGC
CAGGTCCGCG ACGTCGAGGC GACCCCCACC GAGCTGTCGG TGCTGGCCGC GACCCGGACG
ATCAACAGCC GGGGCGACAC CCTGAACACC CCGACGGCGA CCATCACCCT GTCCACCCCG
GCCGAGGGGG TGATCCGGGT GCGCATCGAA CACCACGCCG GCGCGCGGGA CCCGGGCCCG
GAGTTCGCCC TGCCGGGTGC CACCGAGCGC CGGCCGCAGA TCCGGATCGA GGCCGATCAC
GCGAGCCTGG ACGCGGGCGG CCTGACCGCC CGGATCCGGC GCGACGGTCC GCTGCGGCTG
GACTTCGAGG CCGGCGGCCG GGTGCTCACC GGCGCCGACG CGACCAGTGT CGGCCTGGCC
ACCGGACCCG ACGGCACGCC CTACGTATTC GCCCAGTTGG GCCTGGACGT CGGCGAGGTG
GTCTACGGGC TCGGTGAACG CTTCGGCCCG TTGGCCAAGA ACGGCCAGAG CGTGGACATC
TGGAACGCCG ACGGGGGAAC CAGCAGCGAG CAGGCCTACA AGAACGTGCC GTTCTTCTGG
ACGAACCGGG GTTACGGCGT CCTGGTCAAC CACCCCGAGC TGGTCTCGTT CGAGATCGGG
TCCGAAGTGG TGTCCCGTAC CCAGTTCTCG GTCACCGGCG AGCATCTGGA GTACCTGGTC
ATCCTCGGTC CGACGCCCAA GGAGATCCTG CGCCGCTACA CCGCGCTGAC CGGCCGCGCC
CCCCGAGTCC CGGAGTGGAC CTTCGGCCTG TGGCTGAGCA CCTCGTTCAC CACCGCCTAC
GACGAGCGGA CCGTGAGCTC GTTCATCGAC GGCATGGCCG AGCGCGAGAT CCCGCTGAGC
GTCTTTCACT TCGACTGCTT CTGGATGCGC GAGTTCCGCT GGTGCGACTT CGAGTGGGAC
CCGCGAACCT TCCCCGAACC GGAGGCGATG CTGGCCCGGC TCAAGGCCCG CGGGCTGCGG
GTCTGCGTGT GGATCAACCC GTACATCGCG CAACGGTCGG CCCTGTTCGA GGAGGGTCGG
GCCAAGGGGT ACCTGGTCAC CCGGGCCGAC GGCAGCCTGT GGCAGTGGGA CCTGTGGCAG
GCCGGCATGG CCCTGGTCGA CTTCACCAAC CCGGCCGCCG CGCAGTGGTA TGCCGGGCAT
CTGGAGCGGC TGCTCGATCA GGGGGTGGAC GCGTTCAAGA CCGACTTCGG CGAGCGCATC
CCCACCGATG TGGTCTGGTT CGACGGCTCG GACCCGGACC GGATGCACAA CTACTACACC
CACCTGTACA ACCGCACCGT CTTCGAATTG CTGGAGCGGC GTCGGGGCCG GGGCGAGGCG
GTCCTGTTTG CCCGGTCGGC CACCGTCGGC GGCCAGCAGT ACCCGGTGCA CTGGGGTGGG
GACTGCGATT CCACCTATGC CTCGATGGCC GAGACGCTGC GCGGTGGTCT GTCCCTGGCC
GCCTCCGGGT TCGGCTACTG GTCGCACGAC ATCGGTGGGT TCGAGGGCAC CCCCGACGCC
GGGGTATTCA AGCGGTGGCT GGCGTTCGGG CTGCTGTCCA GCCACAGCCG GCTGCACGGC
TCGGATTCCT ACCGGGTGCC CTGGGCGTTC GACGAGGAGG CCGTCCAGGT CGCGCGCCGG
TTCACCCGGC TGAAGATGAC GCTAATGCCG TACCTGCTCG GCGCGGCCCG CCAGGTCACC
GAGGAGGGAA CCCCGATGAT CCGGCCGATG GTCATGGAGT TCCCCGACGA CCCGGCCACC
GAGTACCTGA GCACCCAGTA CATGCTCGGC GACGCGTTGC TGGTCGCCCC CGTGTTCCAC
CCCGACGGCG ACGTGCGCTA CTACGTGCCC GCGGGTACCT GGACCGGTCT GCTGGACGGG
CGCACCGTGG TCGGCCCGCG CTGGGTGCAC GAGCGGCACG GCTTCGACAG CCTTCCCCTG
CTGGTCCGGC CGGGTTCGGT GATTCCGATC GGCGCGCGGT CCGACGGTCC GGAGTACGAC
TACGCCGACG GCGTCGCGCT GCACCTGTTC GACCCGGCGG CGCTGACCGA CCGCACCGTC
CGGGTGCCCA CCGCCGGCGG GGCCGCGGTG GAGTTCCGGA TCCGCCGGGA GGGTCGCCAG
CTGACCGTCT TCGGCCCGGA TCCGGCCGAA CACTCGTGGT CGGTGGTGTG TGCGGCGGCC
GAAAAGGCCG ATGGAAGCGC TTCCACAAGG GCAGCGGAGT CGGCTAGCGT CTGCATGACG
CTGCCCGGCC CGGTGGCCGA GCCACTGCCG CCTCGGAAGG ATTCCTGA
|
|---|
| Protein sequence | MRFSDGYWMV REGFQVRTAR QVRDVEATPT ELSVLAATRT INSRGDTLNT PTATITLSTP
AEGVIRVRIE HHAGARDPGP EFALPGATER RPQIRIEADH ASLDAGGLTA RIRRDGPLRL
DFEAGGRVLT GADATSVGLA TGPDGTPYVF AQLGLDVGEV VYGLGERFGP LAKNGQSVDI
WNADGGTSSE QAYKNVPFFW TNRGYGVLVN HPELVSFEIG SEVVSRTQFS VTGEHLEYLV
ILGPTPKEIL RRYTALTGRA PRVPEWTFGL WLSTSFTTAY DERTVSSFID GMAEREIPLS
VFHFDCFWMR EFRWCDFEWD PRTFPEPEAM LARLKARGLR VCVWINPYIA QRSALFEEGR
AKGYLVTRAD GSLWQWDLWQ AGMALVDFTN PAAAQWYAGH LERLLDQGVD AFKTDFGERI
PTDVVWFDGS DPDRMHNYYT HLYNRTVFEL LERRRGRGEA VLFARSATVG GQQYPVHWGG
DCDSTYASMA ETLRGGLSLA ASGFGYWSHD IGGFEGTPDA GVFKRWLAFG LLSSHSRLHG
SDSYRVPWAF DEEAVQVARR FTRLKMTLMP YLLGAARQVT EEGTPMIRPM VMEFPDDPAT
EYLSTQYMLG DALLVAPVFH PDGDVRYYVP AGTWTGLLDG RTVVGPRWVH ERHGFDSLPL
LVRPGSVIPI GARSDGPEYD YADGVALHLF DPAALTDRTV RVPTAGGAAV EFRIRREGRQ
LTVFGPDPAE HSWSVVCAAA EKADGSASTR AAESASVCMT LPGPVAEPLP PRKDS
|
|---|
| |