| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0181 |
|---|
| Symbol | |
|---|
| ID | 8445761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 202850 |
|---|
| End bp | 204043 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645039328 |
|---|
| Product | xylose isomerase |
|---|
| Protein accession | YP_003199603 |
|---|
| Protein GI | 258650447 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2115] Xylose isomerase |
|---|
| TIGRFAM ID | [TIGR02631] xylose isomerase, Arthrobacter type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCGTG CGGCAACCCC CGACGATCGT TTCTCGTTCG GCCTGTGGAC GGTGTCCTGG
CAGGCCCGCG ACCCCTTCGG TGACGCCACC CGGCCGGCGC TTGACCCGGT GGAGGCGATC
GGCAAGCTGG CCGAGGCCGG CGCGTGGGGC GTCACCTTCC ATGACGACGA CGTGGTGCCG
TTCGGCTCCG ACGACGCGAC CCGCGACCGG CTGATCACCG CCTTCCGGGA TGCCTGCACC
GAGCACGACG TGACCATCGA GATGGTCACC ACCAACCTGT TCACCCACCC CGTCTTCAAG
GACGGCGGCT TCACCTCCAA CGACCGTTCG GTCCGCCGGT TCGCGCTGCG CAAGGTGCTG
CGCAACATCG ACCTGACCGC CGAGCTGGGG GCCAAGACGT TCGTCATGTG GGGCGGCCGG
GAAGGCAGCG AGTACGACGG GTCCAAGGAC GTCAACGCCG CGCTCGACCG GTACGCCGAG
GGCGTGGACA CGGTGGCCGC CTACATCAAG AGCCGCGGCT ACGACATCAA GATCGCCCTG
GAGCCCAAGC CGAACGAGCC CCGGGGTGAC ATCTTCCTGC CGACCATCGG GCACGCGCTT
GGCTTTATCG CCAAGCTCGA GCACGGCGAC ATCGTCGGGC TGAACCCCGA GGTCGGGCAC
GAGCAGATGG CCGGGCTCAA CTTCACCCAG GGCATCGGGC AGGCGCTGTG GGCCGGCAAG
CTGTTCCACA TCGATCTCAA CGGCCAGCGG TCCATCAAGT ACGACCAGGA CCTGGTGTTC
GGTCACGGCG ACCTGCTGTC CGCGTTCTTC ACCGTGGACC TGCTCGAGAA CGGCTTCCCC
AACGGCGGTC CCCGCTACGA CGGTCCGCGG CACTTCGACT ACAAGCCCTC GCGCACGGAC
GGCTTCGACG GCGTGTGGGC CTCCGCCCGG GCCAACATCG CCACCTACCT GCTGCTCAAG
GAGCGGGCGC TGGCCTTCCG GGCCGATCCG GAGGTGCAGG CCGCGCTCGA GGCGTCGGGT
CTGTCCGAAC TGGCCGTCCC GACCCTCGCC GCCGGCGAGA GCATCGAGGA CCTGCTGGCC
GACGAATCCG CGTTCGAGAG CTACGACGCC GACAAGGCGG CCGAGCACTC CTACGCCTTC
GTGCACCTGA ACCAGCTCGC GGTCGAGCAC GCCCTGGGTG CCCGGCTGAG CTGA
|
|---|
| Protein sequence | MVRAATPDDR FSFGLWTVSW QARDPFGDAT RPALDPVEAI GKLAEAGAWG VTFHDDDVVP
FGSDDATRDR LITAFRDACT EHDVTIEMVT TNLFTHPVFK DGGFTSNDRS VRRFALRKVL
RNIDLTAELG AKTFVMWGGR EGSEYDGSKD VNAALDRYAE GVDTVAAYIK SRGYDIKIAL
EPKPNEPRGD IFLPTIGHAL GFIAKLEHGD IVGLNPEVGH EQMAGLNFTQ GIGQALWAGK
LFHIDLNGQR SIKYDQDLVF GHGDLLSAFF TVDLLENGFP NGGPRYDGPR HFDYKPSRTD
GFDGVWASAR ANIATYLLLK ERALAFRADP EVQAALEASG LSELAVPTLA AGESIEDLLA
DESAFESYDA DKAAEHSYAF VHLNQLAVEH ALGARLS
|
|---|
| |