Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0178 |
Symbol | |
ID | 8445758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 199443 |
End bp | 200831 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645039325 |
Product | Pyridoxal-dependent decarboxylase |
Protein accession | YP_003199600 |
Protein GI | 258650444 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACG AACCGGGATC CGTCGCCGAC CTGATCCGTA CGGCCGCCGA GGCCGTCATC GACTACCGGG CCGGGCTGCC GCACCGCCCG GTCGCCGGCC CGGCCGATCG GGCGGCCCTG CTGGCCGCCC TCGGTGGGCC GCTGCCGGCC GGGCCGACGT CGCCGGACCG GGTGATCGAC GACCTCGTCG TCGCCGCCGA TCCCGGCCTG GTGGCCACGG CCGGCCCGCG GTTCTTCGGG TTCGTGATCG GCGGGTCCCT GCCGGCGGCC ACGGCGGCGG ACATCCTGGC CGTCGGGTGG GACCAGGTGG CGTTCAACGC GATCTCCTCC CCCGCCGCGA GTGTGGTGGA GGAGGTGGCC GGCGGCTGGT GCAAGCAGCT GCTCGGAATC CCGGCGTCGG CGTCCGTCGG CTTCGGCACC GGCGCGCAGT CGGCCAACAC CGTCGGGCTG GCGACCGCCC GGCACCAGGT ACTGGCCGCC GCCGGGTGGG ACGTCGAGCG AGACGGTCTG GCCGGGTCGC CCCGGGTGCG GGTGGTCGCG TCAGTGGAGC GGCACGCCAC GGTGGACCGG TCGTTGCGGC TGCTCGGCCT GGGCAACGCC AGCGTTCGAC CGGTCGCCGC CGGCCCGCAG GGGGCCATCG ACATCAATGA CCTGGCAAAG GTTCTGGCCG ACGAGCCGAC CATGCCGACG ATCGTCGTGC TGCAGACGGG CAACGTCAAC ACCGGCGCCT GCGACGACCT GCGAGCCGCG ATCGGGCTGG CCCGCACGGT CGAGCACAGC TGGGTGCACG TCGACGGCGC CTTCGGTCTC TGGGCAGCGG CCTGCCCGCA GACCCGCGCA CTGACCGACG GCATCGAGCT GGCCGACTCG TGGTGCACCG ACGCGCACAA GTGGCTCAAC GTGCCCTACG ACTGCGGCCT GGTCTTCTGC GCCGATCCGT CGGCGCACGT CGCGGCCGCA TCGTACTCGG CGGCCTACCT GACCGGGGCC GGCACGGCCG GGTCGCCGTC CGACTACGTG CTCGAATCCT CGCGCCGAGC CCGGGGTTTC GCGGTGTGGG CGGCCCTGCG CGAGCTGGGT GAGACCGGGG TGGCCGACCT GGTCGCCCGG TGCTGCGCGC TGGCCCGCCG GTTCGCCGAC GGGCTGGCCG CCGGCGGGGT CGAGATCGTC AACGACGTCG TGCTCAACCA GGTGCTGGCC GACTTCGGCT CCGACGAGCG CACCGACGCG GTGATCGACG CCGTGCAACG GGAGGGCACC TGCTGGCTGG GCGGGACCAC CTGGCGTGGG CGACGGTTGA TGCGCATCTC CGTGTCGAAC CACTCCACCA CCGAGGACGA CATCGACCGC AGCGTCGCGG CCGTCCTGCG CCTGGCCGCC GGGCTCTGA
|
Protein sequence | MTDEPGSVAD LIRTAAEAVI DYRAGLPHRP VAGPADRAAL LAALGGPLPA GPTSPDRVID DLVVAADPGL VATAGPRFFG FVIGGSLPAA TAADILAVGW DQVAFNAISS PAASVVEEVA GGWCKQLLGI PASASVGFGT GAQSANTVGL ATARHQVLAA AGWDVERDGL AGSPRVRVVA SVERHATVDR SLRLLGLGNA SVRPVAAGPQ GAIDINDLAK VLADEPTMPT IVVLQTGNVN TGACDDLRAA IGLARTVEHS WVHVDGAFGL WAAACPQTRA LTDGIELADS WCTDAHKWLN VPYDCGLVFC ADPSAHVAAA SYSAAYLTGA GTAGSPSDYV LESSRRARGF AVWAALRELG ETGVADLVAR CCALARRFAD GLAAGGVEIV NDVVLNQVLA DFGSDERTDA VIDAVQREGT CWLGGTTWRG RRLMRISVSN HSTTEDDIDR SVAAVLRLAA GL
|
| |