Gene Namu_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0172 
Symbol 
ID8445752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp192849 
End bp194024 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content72% 
IMG OID645039319 
Productamidohydrolase 2 
Protein accessionYP_003199594 
Protein GI258650438 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG CTTTCCTCGA AGGGCTTTCG GGCGTCGACG ACGACGTAGC GGCCGCGCTG 
GCCGAGCCCC TGATCGACCA TCACGTCCAC GGCTGCTTCA CCGGAGAGCT GGATCGGGCC
GGGTTCGAGG AATCGCTGAA CGAGGCTACG GCCGATCCGA TTCCAGCGTT CATGACGCAG
TTCGACAGCC AGCTCGGGTT TGCCGTGCGC CGCTGGTGTG CACCGCAGCT CGACCTACCG
CCCGCGGTCG ACGCCGACGA GTACTGGCAT CGGCGCTCGA CCATGACCCC AGAGCTGCTG
GCCCGGGCCA TGCTGCCCGC CGCCGGGGTG TCGACCTGGC TGGTGGACTC CGGCTTCTGG
ACCGATCGGC TGTGCCCGCC CCGGCAACTG GCGCACTGGG CGGGTGGGGT CGCCGGCGAG
GTGCTGCGGC TGGAGTCGCT GGCCGAAACC CTGCTCGCAG AAGGAATTTC CGGACCGTCC
TGGGCGCAGG AGTTCCGCGC TCGGCTGGCC GCCGCCGGCC CGGCCGTGGT CGCCGCGAAG
ACCGTCGCGG CGTACCGGTG CGGCCTGGAC ATCGACTGGT CGCGACCCTC CGATGCGGCG
GTCGGCCGGG CCGCCGCGCC GTTGCCCGGT TCCCCGACGG TGCGGGTCGA CGACCCCACG
ATCATCGCGT TCGGCGTGCA CGCGGCCGCC GACGCCGGCC TGCCCGTGCA GATCCACGTC
GGACTGGGCG ACCGGGACCT GGACCTGCGG ACCGCCGACC CGCTGCTCCT GGTGCCCTTG
CTGCACGCAA GACGCACCGT CCCGATCGTC CTGCTGCACT GCTACCCCTA TCACCGGGCG
GCCGGGTACC TCGCCCAGGC GTTCGGCCAC GTCTATCTCG ATGTCGGTCT GGCCATCAAC
CATCTCGGTG TCCGCTCGGT CGAGTTGGTC GCCGAGTCAC TGGAACTCGC CCCGTTCGCC
AAGCAGCTCT ACTCCTCCGA CGCCTGCGGC CCGCCGGAAC TGCACCTGTT GGGCGCCGTG
CTGTGGCGCC GCGGGATGGC CCGGACACTT GGCCGGTGGG TGCGCGAGGG TGACTGGTCG
GCGACCGACG CGGCCCGGGT GGCCCGGATG ATCGGGGCCG ACAACGCCCG CCGGGTCTAC
CGACTGCCGG CCGACGGGCC GTCGTGGGCG GCGTGA
 
Protein sequence
MSAAFLEGLS GVDDDVAAAL AEPLIDHHVH GCFTGELDRA GFEESLNEAT ADPIPAFMTQ 
FDSQLGFAVR RWCAPQLDLP PAVDADEYWH RRSTMTPELL ARAMLPAAGV STWLVDSGFW
TDRLCPPRQL AHWAGGVAGE VLRLESLAET LLAEGISGPS WAQEFRARLA AAGPAVVAAK
TVAAYRCGLD IDWSRPSDAA VGRAAAPLPG SPTVRVDDPT IIAFGVHAAA DAGLPVQIHV
GLGDRDLDLR TADPLLLVPL LHARRTVPIV LLHCYPYHRA AGYLAQAFGH VYLDVGLAIN
HLGVRSVELV AESLELAPFA KQLYSSDACG PPELHLLGAV LWRRGMARTL GRWVREGDWS
ATDAARVARM IGADNARRVY RLPADGPSWA A