Gene Namu_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0158 
Symbol 
ID8445738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand- 
Start bp172741 
End bp173997 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content75% 
IMG OID645039305 
Productprecorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 
Protein accessionYP_003199580 
Protein GI258650424 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTCG CCGTGGATGT CGGTCTGGAT GTCAAGGATG TCGGGGTGGA TGTGGTCGGG 
CTCGGCGCCG ACGGATGGGA CGGGTTGTCC CCCCACAGCC GCGCGGTGCT GACCCGGGCC 
GCGGTGGTGA TCGGCGGCGC GCGCCAGCTG GCGCTGCTGC CCGAGCAGCC CGGCCAACGG 
CGATTGCACC TGCCCACGCC GCTGCGTGCC GGACTCCTGG ACCTGCTCGA CTCGTCCGAT 
TCGCCGGCCG GTCCGGTCGC GGTGCTCGCC TCCGGTGATC CGTTGCTGTC CGGCATCGGC 
GGCACCCTGG TCGAGCTGCT GGGCGCGGCG CGGGTACGGA TTCACCCGGC GGTGTCCTCG 
GTCTCGCTGG CGGCGGCCGA GATGCGCTGG CCGTTGGCCG GTGTCGACGT GGTCAGCCTG 
GTCGGCCGGG ATCTGGCCAC CCTGCGCCGG GTGCTCTCGC CCGGCCGGCG GGTGCTGGCA 
CTCTCCGCGG ACGAGCGCAC CCCGGCCGCG GTCGCCGCGC TGCTCACCGA GGCCGGTTTC 
GGCCCGTCCC GGCTGACCGT CCTGGGCGAC CTGGGCAGCC CGCAGCAGAG CCGAATCGAC 
CTGATCGCCA GCGACTTTCG CGGCCCGGTG AGCCGCCTGA ACATCCTGGC GATCGACTGC 
GTGGCCGTCC CGGGCACCCC ACCCCGGCCG CTCGTCGGTG GCCTGCCGGA CGACGCGTTC 
GATCACGACG GGCAGCTGAC CAAGCGGGAC GCCCGCGCAT CGGCCCTGGC CCGGTTGGCT 
CCGGCTCCCG GTCAGTTGCT CTGGGATGTC GGCGCCGGGG CCGGGTCGGT GGCGATCGAG 
TGGTCCCGGG TCGACCCGCG CTGCCGGGCC GTGGCGATCG AACGGGACCC GGCCCGCGCG 
GCCCGGATCG GCGGCAACGC CGCGGCGCTG GGGGTGCCCG GGCTCGTGGT GGTCACCGGA 
GCGGCTCCGG CCGCCCTGGC CGACCTGCCT GCCCCGGACG CGGTGTTCGT CGGCGGCGGC 
GCCACCGTCC CTGGACTGCT CGACTCCTGT TGGGCAGTCT TGGGTTCCGG TGGACGCCTG 
GTGGTGCACG GGGTGACGCT GGAGACCGAA CGGCTCCTGG TCGACTGGCA CGCACGGGTC 
GGCGGCGAGC TGATCCGGCT GTCGGTGGAG CGCGTGGAGC CGCTGGGCTC GTTCCGCGGC 
TGGGCGCCGG CCCGGCCGAT CGTGCAGTGG GCCGTGACCA AGGAGTCGAC CGGATGA
 
Protein sequence
MDVAVDVGLD VKDVGVDVVG LGADGWDGLS PHSRAVLTRA AVVIGGARQL ALLPEQPGQR 
RLHLPTPLRA GLLDLLDSSD SPAGPVAVLA SGDPLLSGIG GTLVELLGAA RVRIHPAVSS 
VSLAAAEMRW PLAGVDVVSL VGRDLATLRR VLSPGRRVLA LSADERTPAA VAALLTEAGF 
GPSRLTVLGD LGSPQQSRID LIASDFRGPV SRLNILAIDC VAVPGTPPRP LVGGLPDDAF 
DHDGQLTKRD ARASALARLA PAPGQLLWDV GAGAGSVAIE WSRVDPRCRA VAIERDPARA 
ARIGGNAAAL GVPGLVVVTG AAPAALADLP APDAVFVGGG ATVPGLLDSC WAVLGSGGRL 
VVHGVTLETE RLLVDWHARV GGELIRLSVE RVEPLGSFRG WAPARPIVQW AVTKESTG