| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0122 |
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| Symbol | |
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| ID | 8445702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 136197 |
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| End bp | 138017 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645039270 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003199545 |
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| Protein GI | 258650389 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 70 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCT CTCCCGAATT GCACAAAGGA CTGAACCAGC GGCACCTGAC CATGATCGCC
ATGGGCGGCG TCATCGGGGC CGGCCTGTTC GTCGGATCCG GCGCGGTCAT CAACGACGCC
GGTCCGGGCG CGTTCCTGAG CTACGCGTTG TGTGGCGTGC TGATCGTCAT GGTGATGCGG
ATGCTCGGCG AGATGGCCGT GGCCAACCCG TCGACCGGCT CGTTCGCCGA CTACGCCCGG
CGCGCTTTGG GCGGCTGGGC GGGCTTCTCG GTCGGCTGGC TGTACTGGTA CTTCTGGGTC
ATCGTCGTCG GGTTCGAGGC GGTGGCCGGC GCCAAGATCC TGCAGTACTG GATCGACGTC
CCGCTCTGGC TGCTCTCGTT GCTGCTGATG ATCCTGATGA CGGCGACCAA CCTGTTCTCG
GTCCGCTCGT TCGGAGAATT CGAGTTCTGG TTCGCCGGAA TCAAGGTCGC CGCGATCGTC
GTGTTCATCG TGCTCGGCGG GTTGTACGTG CTGGGCATCT GGCCCAACAA GAGCATGGAC
TTTTCCAATC TGTGGGCGCA CGGCGGGTTC TTCCCCAATG GCCTGGGCGC GGTGTTCTCC
GGCATCGTCG TGGTCATCTT CTCGATGGTC GGGGCGGAGA TCGCAACCAT CGCGGCCGCC
GAATCCAAGG ATCCGGCCCG CTCCATCGCC AAGGCGACCA ACTCGGTCAT CGTCCGGATC
GCCATCTTCT TCGTCGGCTC GGTGTTCCTG CTGGCGGTGA TCCTGCCGTG GAACTCCAAC
GAGCTGGGCC AGTCGCCGTA CGTGAGCGCA TTCAAGGTGA TGGGCCTGCC CTACGTCGAC
CACCTGATGA ACGCCGTAGT GCTGACCGCG GTGCTGTCCT GCCTGAACTC CGGGCTGTAC
ACCGCATCCC GGATGCTGTT CGTGCTGGCC GCCCGGCGCG AGGCACCGGT CGCGCTGATC
ACCGTGAACG GCCGCGGGGT GCCGATGTGG GCCATCCTGA CCTCGACGGT GGTCGGCTTC
CTGTGCGTGA TCGCCGCGGC GATCTCCCCG GACACCGTCT TCCTGTTCCT GCTGAATTCC
TCCGGCGCCA TCATCCTTTT CGTCTACCTG CTGATCGCGA TCTCCCAGCT GATCCTGCGT
CGACGGACGT CGGAGGACAA GCTGCAGGTC AAGATGTGGC TCTACCCGGC GCTGACCATC
CTGACCATCG CCGCCATGCT CGCCGTGCTG GTGCTGATGT ACCTGGAGGA ATCCACCCGG
CCGCAACTGC TGCTCAGCGT GTTGGCCTGG GCCGTGGTGC TGGTGCTGTA CGCGGTGACC
AAGTGGCGGG GCGGATCGGT GGGCCGGGAC TTCGACGCGG CCCCGGCTGA CGGGGGCACC
CGGGTGCTGG TGCTGGCCAA CGAGACGGTG GGGGCCGGCG AGCTGATCGA CGAGCTGCGC
ACGATCGACC AGCAGGGCCA GGCGCAGTAC TTCGTCTGCG TGCCGGCCAA TCCGGTCGAC
ACCGGTCAGG CCGAACACAC CGGGGCCGTC TGGGTCTGGC AGGAGACGGT CAAGGCCGCG
CAGGGCCGGC TGGACAGCAC CCTGGAGACG CTGCGCGGAC ACGGCCTGTC GGCCGACGGT
GAGCTCGGCG ACCACCGGCC GATGGTCGCG TTGGGCGCGG CCGTCACCGA GTTCAAGCCC
GACCGGATCG TCATCGCCAC CCATCCCGAC GTGCACTCGG CCTGGTTGCG GCAGGACGTC
GTCGACCGGG CCCGCAAGGC CTACCCGAGC ATCCCGGTCC GGCACATCGT CGCGCACGTC
ACCGAGCACC CCGGCGTCTG A
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| Protein sequence | MAGSPELHKG LNQRHLTMIA MGGVIGAGLF VGSGAVINDA GPGAFLSYAL CGVLIVMVMR
MLGEMAVANP STGSFADYAR RALGGWAGFS VGWLYWYFWV IVVGFEAVAG AKILQYWIDV
PLWLLSLLLM ILMTATNLFS VRSFGEFEFW FAGIKVAAIV VFIVLGGLYV LGIWPNKSMD
FSNLWAHGGF FPNGLGAVFS GIVVVIFSMV GAEIATIAAA ESKDPARSIA KATNSVIVRI
AIFFVGSVFL LAVILPWNSN ELGQSPYVSA FKVMGLPYVD HLMNAVVLTA VLSCLNSGLY
TASRMLFVLA ARREAPVALI TVNGRGVPMW AILTSTVVGF LCVIAAAISP DTVFLFLLNS
SGAIILFVYL LIAISQLILR RRTSEDKLQV KMWLYPALTI LTIAAMLAVL VLMYLEESTR
PQLLLSVLAW AVVLVLYAVT KWRGGSVGRD FDAAPADGGT RVLVLANETV GAGELIDELR
TIDQQGQAQY FVCVPANPVD TGQAEHTGAV WVWQETVKAA QGRLDSTLET LRGHGLSADG
ELGDHRPMVA LGAAVTEFKP DRIVIATHPD VHSAWLRQDV VDRARKAYPS IPVRHIVAHV
TEHPGV
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