Gene Namu_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0106 
Symbol 
ID8445686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp115257 
End bp115664 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID645039254 
ProductProtein-tyrosine phosphatase, low molecular weight 
Protein accessionYP_003199529 
Protein GI258650373 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones91 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC GGCCCAGTGT CCTTTTCGTG TGCGTGCACA ACGCCGGCCG CTCGCAGATG 
GCCGCCGGAT TTCTCACCGC CCTCGCGCAC GGTCAGGTGG AGGTCCGCTC GGCCGGATCG
ATGCCCGCGG ACCAGGTCAA CCCGGTCGCG GTGCAGGCCA TGGCCGAGGT CGGAGTCGAC
ATCGCCGACC AGCAGCCCAA GATCCTGACC ACCGACGCGG TGCAGGCCTC GGATGTCGTC
ATCACCATGG GCTGCGGCGA CGCCTGCCCG ATCTTCCCCG GAAAACGCTA CGAGGATTGG
AAACTGGACG ACCCGGCCGG GCAGGGGATC GACAGTGTCC GACCCATCCG GGACGACATC
CGCACCCGGG TGCTGGCCCT GATCGACGAG CTGCTCCCCG CCCAGTGA
 
Protein sequence
MSDRPSVLFV CVHNAGRSQM AAGFLTALAH GQVEVRSAGS MPADQVNPVA VQAMAEVGVD 
IADQQPKILT TDAVQASDVV ITMGCGDACP IFPGKRYEDW KLDDPAGQGI DSVRPIRDDI
RTRVLALIDE LLPAQ