| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0094 |
|---|
| Symbol | |
|---|
| ID | 8445674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 105992 |
|---|
| End bp | 106969 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645039242 |
|---|
| Product | Helix-turn-helix type 11 domain protein |
|---|
| Protein accession | YP_003199517 |
|---|
| Protein GI | 258650361 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 85 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATG CTCCGGGTAC CAGTGGCCGC CTTCTCCGCC TGCTCTCGCT GCTCCAGGCC
CGCCGGGACT GGCCCGGTGA GGTGCTGGCG GAGCGGCTCG AGGTCAGCCC GCGGACGGTG
CGCCGCGACG TCGACCGGCT CCGCGACCTG GGCTATCCGG TCCGCGCGAC GAAGGGACCG
GACGGTGGCT ACCGGCTGGA CGCCGGAGCC GAGCTGCCCC CGCTGCTGTT CGACGACGAG
CAGGCGGTGG CCGTCGCCGT GGCGCTGCAG ACCGCATCGG CCAGCGTCTC GGGCATCGAG
GAGGGCGCCT TGCGGGCGCT GGCCACGGTG CGCCAGGTGA TGCCGGCCCG GTTGCGAGGG
CGGGTCGACG CCCTGCAGGT CACCGCGGTG CCCACGGACC GGGAGCGGCC CCGGGTGGAT
TCCACCGTTC TCATCGCCGT CGGCAGCGCG GTCCGGGCTC GTGAGGTGCT CAGATTCGAG
TACGAGCGGC CGAATTGGAC GGGCGAGGAG CGGGCCGCCG AACCGCCGCG CCGGGTGGAG
CCGCATCAGC TGGCCACCTG GAGCGGTCGC TGGTATCTGG TCGGCTGGGA TCTGGACCGC
CAGGACTGGC GCACCTTCCG GGTGGACCGG ATGACCCCGA AGACGCCGAC CGGACCCCGG
TTCACGCCGC GCGCGCTGCC CGGCGGCGAC GTGGCCTCCT ACCTGCAGGA CGCCTTCCGC
GGCCGCGAAT GGCCCTGCCG CGGCGAGTTC GTCATCCACG CGCCGGCCGC CGAGGTGCAC
CCGTGGGCCG GCCGGCAGTC GGTGGTCGAG CCGCTCGGGC CGGAGCTCAC CCGGGTGGTC
AGCGGGTCCT GGTCGTGGGA ACGGCTGGCC GCCTGGGTGT CCTGGTGGGA GGTCCCGGTG
GAGATCGTCG GCCCGGACGA GCTCCGCGCG GCCGCCACCC GCCTGGGCCG CCGGTTCCTG
GCCGCCGCCG GGTCGTGA
|
|---|
| Protein sequence | MSDAPGTSGR LLRLLSLLQA RRDWPGEVLA ERLEVSPRTV RRDVDRLRDL GYPVRATKGP
DGGYRLDAGA ELPPLLFDDE QAVAVAVALQ TASASVSGIE EGALRALATV RQVMPARLRG
RVDALQVTAV PTDRERPRVD STVLIAVGSA VRAREVLRFE YERPNWTGEE RAAEPPRRVE
PHQLATWSGR WYLVGWDLDR QDWRTFRVDR MTPKTPTGPR FTPRALPGGD VASYLQDAFR
GREWPCRGEF VIHAPAAEVH PWAGRQSVVE PLGPELTRVV SGSWSWERLA AWVSWWEVPV
EIVGPDELRA AATRLGRRFL AAAGS
|
|---|
| |