| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0093 |
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| Symbol | |
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| ID | 8445673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 104183 |
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| End bp | 105820 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645039241 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_003199516 |
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| Protein GI | 258650360 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATATC CACTGTTCCA TGAGCTCGGA CCGGCCCAGG CTCCAATGGT GCTCAGTCAG
GCCGACTTCG CTCGGGCGTT CCCCAGCGAG GGGGATTACG TCGAGTTCAA GCAAGGGATC
CCGGAGTCCA AGGTCGCAGA GGCCGTCGCT GCGTTCTCCA ACGCGAACGG AGGTGTCGTC
CTCCTTGGTG TCAACGACAC GGGCCGAGTA ACCGGCATTG GCTCCGACGG CGAGACACAG
GCACGCATCC ATCGGGCGGT TGCAGCCGTT CGCGACCCAG GACGATACGA ACTACATGTG
CTCCAAGTCG AAGATCGTCA CGTTCTCGCC CTCGCCGTCC ACCGACGGCG CGAAGGCTTT
GCGCAGATGC ATGACGGACG ACTTCTCATA CGTCGCGGAG CGATGAACTC TGCCCTCATG
GGGAATGAGC TCGCCGTCTT TGTTTCCGGA CGCGCTCTGA CCCGCTTCGA GCAAACACCT
GTCAACACGC TGATCGGAGC GGCCGATCCC AATCTAGTCA CGAAACTTAT CGAGACCTTC
GGCTGGGGAT CCGAGGGCAC ATTGGCGCGA TTGTTCGAAG GCGGTTTGAT TGACACACCC
ACCGAACGGA GCCCGCTGAC GGTAGCCGGC GCTCTCTACC TCCTTCCCCG GCCCGCCGAC
GTTCTCGGAA AAGCCTACAT CGAGATCTTC CGCTATAGAA ATCCGGGCGA GGAGTATGAT
TCTCGAATAG AATTCTCCGG CCCTGCGGAC CAACAGGTCG GAGACGCCAC AGAACACATC
ATGAAAGAAC TCGGCTCGGA TATCGTCATC CTTGGACTTT ACCGCCATGA ACTACCACGT
ATTCCACAAC CAGTACTCCG TGAGGCTTTG GCAAATGCAG TTGCCCATCG ATCGTACGAA
AGCGCACGTC AGTCCATCCG AGTCGAGATT CATCGGGATC GAGTAACCAT CAAGTCACCA
GGCGGCCTAC CCGAACCAGT GACGATCGCC AATATGCGAC AACAGAACGC CTCGAGGAAC
GCTACTGTCA TCAGAATCCT ACGAGCGATG CGTCTGGCTG AGGACGCTGG GCGCGGTGTC
GATGTCATGC AAGATGAGAT GGCTGCTGCG ATGCTCAACC AGCCGATCTT CGATACCGAT
GGGCACCATG TCGAGGTTGT ACTGCCCTTA GGGAGTGCTG TTTCGCCCCC TGAACGTGCA
TGGCTGGCAG AGATCGAACG CCGCGGATCC ATCCGACCCG ACGATCGCCT TTTGCTTGTC
CATGCCGCCC GAGGTGAGTT GCTCACCAAC ACCGTCGCGC GGGAATTGTT AGGGGTGGAC
AGCACTCATG CGCGAGCGTC TCTGGGTCGA TTGAAGGCCA TGGGATACGT ACAGCAGCAC
GGAGAGCGCG GGGGCGCCAC CTACTCGTTA GCCCACGAGT TGGCACCCCC TCCCGGACTA
GGTCTTGCCC AGGACGACCT GCGATCTTTG GTCATTGGCC TTGCCAAGTC GGCTCCAATT
ACCAACGAAT CGGTCCGCGA GCGCACAGGA CTTGACCGCG CAGCCGCGCT TCGGCTCTTG
TCGGAGCTCA CCAACGACGG CCTTCTTGTT CGGCATGGTT CCCGTCGTGG AACCTTCTAC
ACGCTCGCCG AGAAGTAG
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| Protein sequence | MAYPLFHELG PAQAPMVLSQ ADFARAFPSE GDYVEFKQGI PESKVAEAVA AFSNANGGVV
LLGVNDTGRV TGIGSDGETQ ARIHRAVAAV RDPGRYELHV LQVEDRHVLA LAVHRRREGF
AQMHDGRLLI RRGAMNSALM GNELAVFVSG RALTRFEQTP VNTLIGAADP NLVTKLIETF
GWGSEGTLAR LFEGGLIDTP TERSPLTVAG ALYLLPRPAD VLGKAYIEIF RYRNPGEEYD
SRIEFSGPAD QQVGDATEHI MKELGSDIVI LGLYRHELPR IPQPVLREAL ANAVAHRSYE
SARQSIRVEI HRDRVTIKSP GGLPEPVTIA NMRQQNASRN ATVIRILRAM RLAEDAGRGV
DVMQDEMAAA MLNQPIFDTD GHHVEVVLPL GSAVSPPERA WLAEIERRGS IRPDDRLLLV
HAARGELLTN TVARELLGVD STHARASLGR LKAMGYVQQH GERGGATYSL AHELAPPPGL
GLAQDDLRSL VIGLAKSAPI TNESVRERTG LDRAAALRLL SELTNDGLLV RHGSRRGTFY
TLAEK
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