Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0054 |
Symbol | |
ID | 8445633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 63184 |
End bp | 64722 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645039205 |
Product | PTS system, mannitol-specific IIC subunit |
Protein accession | YP_003199481 |
Protein GI | 258650325 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component |
TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 68 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGCTG ACGCGAGCGC AGCCGGAACC ACCAGCAAGA CGTCGAGTAC CCGAGTAGCG GTCCAGAAGT TCGGCACGTT CCTGTCCGGG ATGATCATGC CCAATATCGC GGCGTTCATC GCGTGGGGTT TGATCACTGC TCTGTTCATC GAGAAGGGGC CGTTCCCGAT CGCGGTGATC GGCGGGTTCG GGGTGGACGA CGCGGGGGAT CCGAATCCGG GGTTGGTCGG GCCGATGGTC CGGTACATGT TGCCGATCCT GATCGCGGCG CAGGGCGGCC GGATGATCTA CGGGGTGCGG GGCGCGGTGG TCGCGGTCGT CGCGACGATG GGCGTGATCA TGTGCACGCC GCAGCCGATG TTCCTCGGCG CGATGGTGAT GGGCCCGTTG GCGGCCTGGT TGATGAAGAA GTTGGACTCG GTCTGGGACG GCAAGATCAA GCCCGGTTTC GAGATGCTGG TCAACAACTT CTCCGCGGGT TTCCTGTCCG CCGGTTTGGC CATCGCCAGC TTCTACGTGT TCGGGCCGAT CATCGAGGGT CTGTCCTCGG CGTTGGGTAC CGGGGTGGAC TGGCTGATCT CGCACAGCTT GTTGCCGCTG GCCAGTTTGA TCATCGAGCC GGCCAAGGTG TTGTTCCTGA ACAACGCGAT CAACCATGGG GTGTTGACCC CGCTGGGGAT CAACCAGTCG GCCGAGACCG GGCAGTCGAT CCTGTTCCTG CTGGAGGCCA ACCCCGGTCC GGGTGTCGGT CTGCTGATCG CGTACTCGAT CTTCGGGACC GGTCTGGCCA AGAGCACCGC CCCGGCCGCG GCGATCATCC AGTTCTTCGG CGGGATCCAC GAGATCTACT TCCCGTACGT GCTGATGAAG CCGCTGACCC TGATCGCGAC GATCGCCGGC GGCATGGTCG GCATCTTGAC CCTGACCATC TTCAACGCCG GTCTGCGGGC GCCGGCCGCG CCCGGGTCGA TCATCGCGGT GTTGATCCAG ACACCGGGCA GCAGCCTGGT CGGGGTGTTG TTGTCGGTGA CGTTGGCCGC GGTGACCAGT TTCGTGATCG CCTCGATCAT CCTCAAGGCC AGTAAGAAGA CCGAGGAGAG TGGTGATCTC GCGCAGGCCA CGGCCAAGAT GGAAGGGATG AAGGGCAAGA AGAGCGCTGT TTCCGGGGTG CTCACCGACA TCGAGGCGCA GAAGGAGGAG GCCGACGAGG CCCGCGAGGC CGCGACCCGG TCGGCGCCGA TCCACAAGAT CGTGTTCGCC TGCGACGCCG GGATGGGTTC GTCGGCGATG GGTGCCTCGG TGCTGCGGAA CAAGATCAAG AAGGCTGGGT TCGCCGACAT CACCGTGGTC AACGTGGCCA TCGCGAACCT GGTCGACGAT GTCGATCTGA TCGTGACCCA TCAGGACCTG ACCGCCCGGG CTCGGGACAA GGCCCCCCAC GCCCAACACG TCTCGGTGGC CAACTTCATG AACAGCCCCA AGTACGACGA GATCGTCGAC GAGCTGCACG TCACCAACCC GCAGGGCAGT AGCGCCTGA
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Protein sequence | MTADASAAGT TSKTSSTRVA VQKFGTFLSG MIMPNIAAFI AWGLITALFI EKGPFPIAVI GGFGVDDAGD PNPGLVGPMV RYMLPILIAA QGGRMIYGVR GAVVAVVATM GVIMCTPQPM FLGAMVMGPL AAWLMKKLDS VWDGKIKPGF EMLVNNFSAG FLSAGLAIAS FYVFGPIIEG LSSALGTGVD WLISHSLLPL ASLIIEPAKV LFLNNAINHG VLTPLGINQS AETGQSILFL LEANPGPGVG LLIAYSIFGT GLAKSTAPAA AIIQFFGGIH EIYFPYVLMK PLTLIATIAG GMVGILTLTI FNAGLRAPAA PGSIIAVLIQ TPGSSLVGVL LSVTLAAVTS FVIASIILKA SKKTEESGDL AQATAKMEGM KGKKSAVSGV LTDIEAQKEE ADEAREAATR SAPIHKIVFA CDAGMGSSAM GASVLRNKIK KAGFADITVV NVAIANLVDD VDLIVTHQDL TARARDKAPH AQHVSVANFM NSPKYDEIVD ELHVTNPQGS SA
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