Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0053 |
Symbol | |
ID | 8445632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 59425 |
End bp | 62850 |
Gene Length | 3426 bp |
Protein Length | 1141 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645039204 |
Product | SNF2-related protein |
Protein accession | YP_003199480 |
Protein GI | 258650324 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGGCG AACCGGCCGG GCACGGGCGA GCGCACTGGC GAGGATCCTG GCCGGCGGCC ACCGCCACCG ATCATGGCTT GGCCTGGCAT GTCGGGGATG TCGTCCTGGG CCGGGCCCGG ACCGTGCTGG CTCACGGTGG CGTGCTCACC TGCACCCAGA CCCGGCCCGG TGAACTGCAG GCCACCGTCA ACGGCACCCG GCCGTGGCCC TACCAGGTCG GCGTGTCCTT CGTGATGTCC GGCGGGCGGG TGGGCGCTTT CGAAGGGGAG TGTGATTGCC CGGTCGAGCT GGACTGCAAG CACGCGGTGG CCGCCCTCCT GCACTACCTG GGCAGCCCGG ATGGTCCCGG AGGTCGGGCG CTGTCGGTCA TCGACTCCGG CGTCGACTCC GCCGATCAGA GCCAGGAGAT CGACGAGGAT GCCGCGCCCG GTTGGGAACA ATCGCTGACC CAGCTGCTCG GGGCCTCGCG CAAGCCGCGG GTCGATCGGG ACCGCGTGCA CACCCTGCTG GCGCTGCAGG TCAGCGTCGC GCTGCATCCG TCGTCCGGCC CGTTCGGCGG CGCCGGCGTG CGGATCCGCC CCATCCAGTT CAACGCCCGC AACCGGTGGG TGAGCACCGG GGTGTCCTGG CGCGACCTGC GCTACGGCTA CTACACCGCC CAGTACCGGC CCGAGCAGCT TGAATCCCTG CGCGGGGTCG CCGACCTGGA GCTGCGCCGC AACCCGCAGC AGGCCCTGAC CACCTGGATC GGGCTGGACG GGCCCGGTGG TTCGCAGCTG TGGGATGCGC TGGCCGACGC GCAGCAGGTC GGAATCGATC TGCTGCTCGA CGGGGCGCAC ACCCCGGTCG AACTGTCCGC GGATCCGGCC GAGATCGCCC TGGACCTGGT GCGGGCCGAC ACTCTGCGGG TCCGGCCGAT CCTGCGGCTG GGCGAGCGGA TCCTGGACCC CGACACCACC GCGCTGATCG GTCAGCCGGC CCACGGCCTG ATCCTGGGTC TCGCGGCGGA CCGCCCGGCA ACCCCACCGA TCACGGTGGC GCGGCTGCGT CGGCCCTTGA CCGCCGACCT GGCCGGCATG CTTGACGCGG GCACCATCGA GATCCCGGCG CCGGACGAGA GCCGATTCCT GGCCGAGTAT CTGCCCGGAT TGCGCCGGCG CATCACCGTG CTTTCCAGCG ACAGCTCGGC CCCCCTGCCC GAACCGTCGC CGCCGCGCGC GGTGCTGACC GTCACCCGTG GACCGGGGCA CCGGGTGGCG CTGCACTGGC AATGGCAGGA CGAGTCCGGA CGCCGCCGTG ACCTGGACGA CCGCCGCGGC ATCATTGCCT CCGACCGGAC GGCGATGCGG CAGACGATCG AGGCGCTGCT GGCTACCGAG GTGCTGCCGG ACGACGCCAT CGGGTCCGGC CCGGACGGGC CGCAACCGCA GACCCGGCAC CTGCTGCTGG GCGCAGCCGC CGTCCACTTC ATGACCAGCG CCTGGCCGAT CCTGCGGTCG CGGCCCGAGC TGCTGACCGA GCTCGACGGC CCGGATGCGG AGCTGGAGTA CCGGCCGGCG TCCGGGCAGC CGGAGCTCGA CCTCGGTGGC CATGACGACG GTGATGATGC GGGCAGTGAC GAGGACGGTG ACGAAACCGC TGCCGCCCGG GACTGGTTCG GGCTGTCGGT GCGGGTCAGG GTCGACGGGC AGGACGTGCC GTTTGAGCTG CTGTTCCGGG CCCTGGCCGG CGAGGACTCC CTGCTCATCC TGCCCAGTGG CACCTATCTG GACGTAGCCG ACCTGGACGG CCGGTGGAAC CGGCTGCGCG AGTTGATCGA AGAGTCCCGG GCGATGGACG ACGCCGGCCC CGACGAACTC CGGATCAGCC GGCACACGGC GTCGCGCTGG GCCGAGCTGG AGGACACCGG CCTGCTCGGG CCGAGGGCAG CCGCCTGGCG AGAGCGGATG CGGGCCCTGG CCGTGGGTTC CGGCGAGCGG TACGCCGCGG GTCCGCTGCC GGCTGGGCTG CAGGCGCACC TGCGCAGCTA TCAGCGCGAG GGCTTGGACT GGCTGCGCGA GCGCTTCGAC CAAGGACTGG GTGGCGTCCT GGCCGACGAC ATGGGCCTGG GCAAGACCGT GCAGATGCTC GGTCTGATCG CGCACGCCCG GGAGCAGGAT CCGGCCGGTC CGCCGCTGCT GGTCGTGGCG CCGACCAGCG TGATCGGCAA CTGGGTGGCC GAGGCCGCCC GGTTCACCCC CGACCTGCGG GTCGTTCCGG TGACCACGGG CGGGGGTCGC CGCGGCCGTC CGCTGGCCGA GGTGATCGGG GGTGCCGACC TGGTCGTCAC CTCCTACCAA CTGTTCCGGC TGGGCGCCGA CGAATACCGG GAACTGCCCT GGACGGCGTT GATCCTGGAC GAGGCCCAGT TCGTCAAGAA CGTGCAGTCC AAGGGTTTTC GGTGCGCCCG TGACTTTCCC GCGGCGGTCA CCTTCGCGGT CACCGGGACC CCTCTGGAGA ACAATCTGAT GGAGTTCTGG GCGCTGCTGG CCGTCGCGGC GCCCGGGCTG TTCCCCGACT CGCGCCGATT CACCGAGCAC TACCGGCTGC CGATCGAACG CGGTGGCGCG ACGGAGCGGC TGGACCAGTT GCGGCGTCGG GCCGCGCCGT TCCTGCTCCG CCGGACCAAG GAGCAGGTCG CTCCGGAGTT GCCACCGAAG GTCGAGCAGG TCATCGAGGT CGACCTGAGT CCGCGACACC AGCAGGTGTA CCAGCGGCAT CTGCAGCGCG AGCGGCAAAA GATCCTCGGG CTGCTGCAGG ACAAGCGGTC GCTGGACGAC CACCGGTTCC AAATCCTGCG TTCGCTGACC CTGCTGCGGC AGCTGAGCCT GGACCCCTCA CTGGTGGACG AGAGCTACCG GGACATCCCG TCCAGCAAGC TGGAGGTGGC CATCGACCGG ATCTGCGAGA TCGTGGAGTC CGGTCACCGG GTGCTCGTCT TCAGCCAGTT CACCCGGTTC CTGGCCCGGG CCCGGGATCA GTTGCATCAC CTGGGCATCG CGCACTGCCT GCTGGACGGC CGGACCAAGG ATCGTTCGGC CGTGGTCGAG GCGTTCCGGA CGGGCGTGGC GCCGGTCTTC CTGATCAGCC TCAAGGCCGG CGGGTTCGGC CTGAACCTGA CCGAGGCCGA CTACTGCATC CTGCTCGACC CGTGGTGGAA CCCGGCCGCC GAGGCCCAGG CCATCGACCG CGCGCACCGG ATCGGCCAGA CCAAGAACGT GATCGTTTAC CGCTACGTGG CCCGGGGCAC GATCGAGGAG AAGGTGATGG CGCTCAAGGC CGGCAAGGCC AAGCTGTTCG ACGACGTGCT CGGCGCCGCC GCCGACGCGG GCCGGTCGGC CGGGTCACCG CTGAGTGCGG ACGAGATCCG CGGCCTGCTG GAGTGA
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Protein sequence | MVGEPAGHGR AHWRGSWPAA TATDHGLAWH VGDVVLGRAR TVLAHGGVLT CTQTRPGELQ ATVNGTRPWP YQVGVSFVMS GGRVGAFEGE CDCPVELDCK HAVAALLHYL GSPDGPGGRA LSVIDSGVDS ADQSQEIDED AAPGWEQSLT QLLGASRKPR VDRDRVHTLL ALQVSVALHP SSGPFGGAGV RIRPIQFNAR NRWVSTGVSW RDLRYGYYTA QYRPEQLESL RGVADLELRR NPQQALTTWI GLDGPGGSQL WDALADAQQV GIDLLLDGAH TPVELSADPA EIALDLVRAD TLRVRPILRL GERILDPDTT ALIGQPAHGL ILGLAADRPA TPPITVARLR RPLTADLAGM LDAGTIEIPA PDESRFLAEY LPGLRRRITV LSSDSSAPLP EPSPPRAVLT VTRGPGHRVA LHWQWQDESG RRRDLDDRRG IIASDRTAMR QTIEALLATE VLPDDAIGSG PDGPQPQTRH LLLGAAAVHF MTSAWPILRS RPELLTELDG PDAELEYRPA SGQPELDLGG HDDGDDAGSD EDGDETAAAR DWFGLSVRVR VDGQDVPFEL LFRALAGEDS LLILPSGTYL DVADLDGRWN RLRELIEESR AMDDAGPDEL RISRHTASRW AELEDTGLLG PRAAAWRERM RALAVGSGER YAAGPLPAGL QAHLRSYQRE GLDWLRERFD QGLGGVLADD MGLGKTVQML GLIAHAREQD PAGPPLLVVA PTSVIGNWVA EAARFTPDLR VVPVTTGGGR RGRPLAEVIG GADLVVTSYQ LFRLGADEYR ELPWTALILD EAQFVKNVQS KGFRCARDFP AAVTFAVTGT PLENNLMEFW ALLAVAAPGL FPDSRRFTEH YRLPIERGGA TERLDQLRRR AAPFLLRRTK EQVAPELPPK VEQVIEVDLS PRHQQVYQRH LQRERQKILG LLQDKRSLDD HRFQILRSLT LLRQLSLDPS LVDESYRDIP SSKLEVAIDR ICEIVESGHR VLVFSQFTRF LARARDQLHH LGIAHCLLDG RTKDRSAVVE AFRTGVAPVF LISLKAGGFG LNLTEADYCI LLDPWWNPAA EAQAIDRAHR IGQTKNVIVY RYVARGTIEE KVMALKAGKA KLFDDVLGAA ADAGRSAGSP LSADEIRGLL E
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