Gene Namu_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0044 
Symbol 
ID8445623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp52369 
End bp53544 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content71% 
IMG OID645039195 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_003199471 
Protein GI258650315 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones103 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTGC CGTCGCCGAC GGATCGGCCG GGCCCCCTGG CCGGGATCGT GGTGGCCGAC 
TTCTCCCGGG TGCTGGCCGG CCCGTACGCC ACGATGCTGC TGGCCGACCT GGGTGCGGAC
GTGATCAAGG TCGAGGGTCC GGGCGGCGAC GACACCCGCA GCTGGGTGCC ACCCACCCGC
GACGACGTCG GCACCTACTA CCTGGCCGTC AACCGGAACA AGCGGTCGGT CGTGCTGGAC
CTCAAGGACA CCGGCGACCG GGCTCTGGCG CACGAGCTGT CCGCCCGGGC CGACGTGTTC
ATCCAGAACT TCAAGCCTGG CGGCCTGGCT CGGTTCGGCC TGGACTACGA GTCGGTTCGC
GGCCGCAACG AGCGCATCAT CTACTGCTCG ATCAGCGGGT TCGGGGCGGA CAAGGGCGCC
AACCTGCCGG GCTACGACCT GCTGGTGCAG GGCATGTCCG GGCTGATGAG CCTGACCGGT
GCGCCCGACG GGCCGCCCTT CCGGTCGGGC ATCTCGGTCT TCGACGTGAT GACCGGTCTG
CATTCGGTGA TCGGCGTTCT CGCCGCGCTG CACCACCGCG ACCTGACCGG GCAGGGCCAG
CACATCGAGA CGAATCTGCT GTCCAGCGCG CTGTCGGCGC TGGTGAACCA GAGCTCGGCG
TACGTGGCCG GCGGGGTGGT CCCGGCCCGG ATGGGCAACG CGCACCTGAG CCTGTTCCCG
TACGAGCCGC TGGCCACCGG TGACGGCGAG CTAATCGTGG TCGCCGGCAA CGACGGTCAG
TTCCGCCGGC TGGCCGAGAC GATCGGCCGG CCGGAGCTGG CCGACGATCC GCGCTTCGAC
ACGGTCGGCC GGCGCAACGA CAACCGCGAA CAGCTGCGGC CGTTGCTGCT CGAGGCGTTG
TCGGCCCGCA CCGCGCAGGA ATGGTTCGGC CTCTTCACGG CCGCGGGCCT GCCGTCGGGG
CCGATCAACA CCGTGCAGGG TGGCGTCGAA CTGGCCGAAT CCCTGGGCCT GCAACCGGTG
GTTCAGGTCG GCGAGGCGCA GGTGCCCTCC GTCCGCAACC CGATCCGGCT CTCCGCCACC
CCGCCGGACT ACCGCTACGC CCCACCGGCG TTGGACGAGC AGGGCGAGGA ACTGCGGCGC
TGGCTGCGGG AACCGCGACG AGGCTCCGAT GGCTGA
 
Protein sequence
MDVPSPTDRP GPLAGIVVAD FSRVLAGPYA TMLLADLGAD VIKVEGPGGD DTRSWVPPTR 
DDVGTYYLAV NRNKRSVVLD LKDTGDRALA HELSARADVF IQNFKPGGLA RFGLDYESVR
GRNERIIYCS ISGFGADKGA NLPGYDLLVQ GMSGLMSLTG APDGPPFRSG ISVFDVMTGL
HSVIGVLAAL HHRDLTGQGQ HIETNLLSSA LSALVNQSSA YVAGGVVPAR MGNAHLSLFP
YEPLATGDGE LIVVAGNDGQ FRRLAETIGR PELADDPRFD TVGRRNDNRE QLRPLLLEAL
SARTAQEWFG LFTAAGLPSG PINTVQGGVE LAESLGLQPV VQVGEAQVPS VRNPIRLSAT
PPDYRYAPPA LDEQGEELRR WLREPRRGSD G