Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0044 |
Symbol | |
ID | 8445623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 52369 |
End bp | 53544 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645039195 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_003199471 |
Protein GI | 258650315 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 103 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGTGC CGTCGCCGAC GGATCGGCCG GGCCCCCTGG CCGGGATCGT GGTGGCCGAC TTCTCCCGGG TGCTGGCCGG CCCGTACGCC ACGATGCTGC TGGCCGACCT GGGTGCGGAC GTGATCAAGG TCGAGGGTCC GGGCGGCGAC GACACCCGCA GCTGGGTGCC ACCCACCCGC GACGACGTCG GCACCTACTA CCTGGCCGTC AACCGGAACA AGCGGTCGGT CGTGCTGGAC CTCAAGGACA CCGGCGACCG GGCTCTGGCG CACGAGCTGT CCGCCCGGGC CGACGTGTTC ATCCAGAACT TCAAGCCTGG CGGCCTGGCT CGGTTCGGCC TGGACTACGA GTCGGTTCGC GGCCGCAACG AGCGCATCAT CTACTGCTCG ATCAGCGGGT TCGGGGCGGA CAAGGGCGCC AACCTGCCGG GCTACGACCT GCTGGTGCAG GGCATGTCCG GGCTGATGAG CCTGACCGGT GCGCCCGACG GGCCGCCCTT CCGGTCGGGC ATCTCGGTCT TCGACGTGAT GACCGGTCTG CATTCGGTGA TCGGCGTTCT CGCCGCGCTG CACCACCGCG ACCTGACCGG GCAGGGCCAG CACATCGAGA CGAATCTGCT GTCCAGCGCG CTGTCGGCGC TGGTGAACCA GAGCTCGGCG TACGTGGCCG GCGGGGTGGT CCCGGCCCGG ATGGGCAACG CGCACCTGAG CCTGTTCCCG TACGAGCCGC TGGCCACCGG TGACGGCGAG CTAATCGTGG TCGCCGGCAA CGACGGTCAG TTCCGCCGGC TGGCCGAGAC GATCGGCCGG CCGGAGCTGG CCGACGATCC GCGCTTCGAC ACGGTCGGCC GGCGCAACGA CAACCGCGAA CAGCTGCGGC CGTTGCTGCT CGAGGCGTTG TCGGCCCGCA CCGCGCAGGA ATGGTTCGGC CTCTTCACGG CCGCGGGCCT GCCGTCGGGG CCGATCAACA CCGTGCAGGG TGGCGTCGAA CTGGCCGAAT CCCTGGGCCT GCAACCGGTG GTTCAGGTCG GCGAGGCGCA GGTGCCCTCC GTCCGCAACC CGATCCGGCT CTCCGCCACC CCGCCGGACT ACCGCTACGC CCCACCGGCG TTGGACGAGC AGGGCGAGGA ACTGCGGCGC TGGCTGCGGG AACCGCGACG AGGCTCCGAT GGCTGA
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Protein sequence | MDVPSPTDRP GPLAGIVVAD FSRVLAGPYA TMLLADLGAD VIKVEGPGGD DTRSWVPPTR DDVGTYYLAV NRNKRSVVLD LKDTGDRALA HELSARADVF IQNFKPGGLA RFGLDYESVR GRNERIIYCS ISGFGADKGA NLPGYDLLVQ GMSGLMSLTG APDGPPFRSG ISVFDVMTGL HSVIGVLAAL HHRDLTGQGQ HIETNLLSSA LSALVNQSSA YVAGGVVPAR MGNAHLSLFP YEPLATGDGE LIVVAGNDGQ FRRLAETIGR PELADDPRFD TVGRRNDNRE QLRPLLLEAL SARTAQEWFG LFTAAGLPSG PINTVQGGVE LAESLGLQPV VQVGEAQVPS VRNPIRLSAT PPDYRYAPPA LDEQGEELRR WLREPRRGSD G
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