Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0033 |
Symbol | |
ID | 8445612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 38984 |
End bp | 40609 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645039184 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003199460 |
Protein GI | 258650304 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCCA AGCATGCCGC CCCCGAACCC GGGGCGGTCG ACGGGAGCGC CCCGCCCCCC CAGTTGACCA AGAACCAGTT GACCAAGAAC CCGGCCCCCA CCCCGGTCGC TGCCGACGAC GACAAGCTGG ACGGCACCGT CTGGCGGATC GCCGGCGTCG TGGTCCTGGG CGCGATCATG TCCATCCTGG ACGTGACCGT GGTCAGCGTT GCGCTGCCGA CGTTCCAGAC CACCTTCGAC GCCAGCTACG CCACCGTCGC CTGGACGATG ACCGGCTACA CGCTGGCCCT GGCCACCGTT ATCCCGCTGA CCGGCTGGGC GGCCGACCGG TTCGGCACCA AGCGCCTGTA CATGCTGGCG TTGACGTTGT TCCTGCTCGG CTCCATCGCC TGCGGTCTGG CCTGGAGCAT CGAGTCGCTC ATCGCCTTCC GGGTCCTGCA GGGCCTGGGC GGCGGCATGT TGATGCCGCT GGGCATGACG ATCATGACCC ACGCGGCCGG CCCGCACCGG ATCGGCCGGG TGATGGCCGT GCTGGGCGTG CCGATGCTGC TCGGCCCGAT CTTCGGCCCG ATCCTGGGTG GCTGGCTGAT CGAGACCGCC AGCTGGCATT GGATTTTCTT CATCAACGTG CCGATCGGCA TCGTCGCGCT GATCGCCGCC TGGCGGGTGC TGGCCAAGGA CGAACCGTCG CCGTCGGAAT CGTTCGACTT CGTCGGCATG CTGCTGCTCT CGCCCGGTCT GGCGCTGTTC CTGTTCGGCG TCTCGACCAT TCCCGAGGAA GGCACCTTCG CCTCGGCCAA GGTGATCATC CCATTGGTGG TCGGGCTGCT GCTGATGACC GGCTTTGTCT TCCACGCCCT GCGCCGCCAG GATCACCCGT TGATCGACCT GCACCTGTTC AAGCGCAAGC AGATGTCGGT CTCGGTCATC ACCATGTCGC TGTTCGCCAT CGCGTTCTTC GGCGCGATGC TGCTGCTGCC CACCTATTTC ATCCAGGTCC GGGAGGAGAG CACGCTGACC GCGGGGCTCC TGCTGGCTCC GCAGGGCATC GGCGCCATGC TGACCATGCC GATCGCCGGT CGCCTGACCG ACAAGATGGG TCCGGGCAAG TTCGTCATCA CCGGCCTGTT CCTGATCCTG ATCGGGATGA GCGTGTTCAC CCAGATCAGC TCGACCACGC CGATTCCGCT GCTGCTCGGG GCGCTGTTCA TCAACGGCCT GGGCATGGGC ATGACGATGA TGCCGATCAT GACGGCGGCC CTGGCCACCC TGCGGCACGC CGAGGTGGCC CGGGGCTCGA CACTGATGAA CATCGTGCAG CAGTCGGCCG CCTCGGTCGG TACCGCGGTG ATGTCGGTCA TCCTGACCAA CCAGTTCCTG AGCAAGCCGG CGATTCAGGC GGCCAAGGCC GCTCAGGAGA ATCCGGCGGC GATGGCCAAC GTGCCGCCGG ACGTGCTGGC CCAGGCCAAG GCCCAGGTGC AGGAGCAGAT GGCCGAGGCC TTCGGCACCA CCTTCTGGGT GGCGCTGGCC ATCCTGGTGG TCACCCTGAT CCCGGCGTTC ATGCTGCCCC GCAAGGCCCG GGAGACCGTC GGCGAGGAGC CGGCGGCGCC GGTGGTCCTG CACTGA
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Protein sequence | MSPKHAAPEP GAVDGSAPPP QLTKNQLTKN PAPTPVAADD DKLDGTVWRI AGVVVLGAIM SILDVTVVSV ALPTFQTTFD ASYATVAWTM TGYTLALATV IPLTGWAADR FGTKRLYMLA LTLFLLGSIA CGLAWSIESL IAFRVLQGLG GGMLMPLGMT IMTHAAGPHR IGRVMAVLGV PMLLGPIFGP ILGGWLIETA SWHWIFFINV PIGIVALIAA WRVLAKDEPS PSESFDFVGM LLLSPGLALF LFGVSTIPEE GTFASAKVII PLVVGLLLMT GFVFHALRRQ DHPLIDLHLF KRKQMSVSVI TMSLFAIAFF GAMLLLPTYF IQVREESTLT AGLLLAPQGI GAMLTMPIAG RLTDKMGPGK FVITGLFLIL IGMSVFTQIS STTPIPLLLG ALFINGLGMG MTMMPIMTAA LATLRHAEVA RGSTLMNIVQ QSAASVGTAV MSVILTNQFL SKPAIQAAKA AQENPAAMAN VPPDVLAQAK AQVQEQMAEA FGTTFWVALA ILVVTLIPAF MLPRKARETV GEEPAAPVVL H
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