Gene Namu_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0029 
Symbol 
ID8445608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp34253 
End bp34924 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID645039180 
ProductGPR1/FUN34/yaaH family protein 
Protein accessionYP_003199456 
Protein GI258650300 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA TCGTCGACCA CCCCAATGCC GACCTGATGC CCGACCTCGC CGACCCGACC 
GCCGGACGGG TCGCCCAGGC CCGGGAGATG GCCTCGGCCC AGGTCCAACT GATCGCCGAC
CCCGCCCCGC TGGGGCTGGC CGCCTTCGCG CTCACCACGT TCCTGCTGAG CCTGGCCAAT
TCCGGCCTGA TGCCGGTGGC CGCCGAACCG GTCGTGCTCG GCGTGGCCCT GGCCTACGGC
GGCCTCGCCC AACTGCTGGC CGGCATGTGG GAATTCAAGA AGGGCAACGT CTTCGGCGCG
ACGGTGTTCA CGTCCTACGG CGCCTTCTGG CTCTCGTTCT GGGCCTACCT GACCTTCTAC
GCCGGGGGCA TCCCGGCCGA GCAGCACGGT GTCGCCGCCG GCTGGCTGCT GATCTGCTGG
GGCATCTTCA CCGTGCTGAT GTTCCTGGGC TCGCTGCGGA CCACCGCGGT GCTGGCCGCC
CTGTTCGCGG TCGTCGTGGT GGCGTTCTTC CTGCTCGGAT TCGGCGCGCT CAACGGCATC
ACCGGCCTGA CCCGGGCCGG TGGCTTCGCC GGCCTGCTGG CCGGAGCGAT GGCCTGGTAC
CTGTGCCTGG CCGGCGTGCT CAGCTCCACC TTCGGCCGGC CGGTCCTGCC CAACAAGTCA
CTGGTGGGCT GA
 
Protein sequence
MTTIVDHPNA DLMPDLADPT AGRVAQAREM ASAQVQLIAD PAPLGLAAFA LTTFLLSLAN 
SGLMPVAAEP VVLGVALAYG GLAQLLAGMW EFKKGNVFGA TVFTSYGAFW LSFWAYLTFY
AGGIPAEQHG VAAGWLLICW GIFTVLMFLG SLRTTAVLAA LFAVVVVAFF LLGFGALNGI
TGLTRAGGFA GLLAGAMAWY LCLAGVLSST FGRPVLPNKS LVG