Gene Namu_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0027 
Symbol 
ID8445606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp31869 
End bp33005 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content74% 
IMG OID645039178 
ProductOmpA/MotB domain protein 
Protein accessionYP_003199454 
Protein GI258650298 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGA GACGAACGCC CCCGACCCTG CCCGTACGCC TGCCCATCCT GGCCGCCGCG 
GTCGCCTTGC TGACGCTCAC CGCGTGCAGT TCGGGCGGCT CGAGCGGATC CGGCGAGTCG
TCGGCGGCGC CGACCAGCGC GGCGCCGGTG ACGGTGGCCG GCAGTGTGGT CAGCACCGCC
GGCTCCTCGA ACGAGGCGCA GATCGTGGTG CCCGAGGTGG TGGCCGCCCA GTGGGCGGCC
CTGGGCTCGG GCAACGGCGT CGAGTGGGTC GCGGTGGCCG GTGACGGCAC CACCAGCACC
ACGCCGGTGG CCGTCGCGGA CGCGGACGCC ACCTCGGCGT TCACCGCGCA GCTCAACGCC
CTGCAGGCCG CGTCCCCGGG CCGGGATGCC CTGGCCGGCC TGGATGCCGT GGCCTCGCCG
GCCGGCTCCC CGGTCTGGGT CTTCTCGCCG CTGCTGGACA CCCAGGGCGC GTTGGACATG
AACCTGCTGG CCTTCGACCA GTCGCCGCCC GATGTGGTGA GCGCCGCGAC CGCGTCCGGG
GCTCTGCCCG ACCTGACCGG CCGTGAGGTC AACTTCGTCG TCACCCCGGT CGCCGGGCAG
CAGAACGCGC TCTCCGACGT CCAGGTGGGC TACCAGCACG CCATCTGGGA GGGCATCGCG
ACCGCCGCCG GCGCGTCCAC CGTCACCTTC TACGACGGCA CCGGGACCGG CGCCGGGACC
GGCACCATCC CCGCGGTCGC CACCCCGGAC CCGACCGACA AGATCTCCTC CGAGGGCTCC
GGCCCGACCC GGACCTGCAC CCTGCCCACC CCGGCGCTGT TCCTGCCCAA CCAGGCCGCG
CTCATCGACA AGGCGGCCAC CCTGACGGCG CTGAGCGAGT GTGTCGGCAC CGTGGACCCG
AGCACCAAGA TCAGCGTCGA GGGGCGCACC GCGGCCGTCC CCGGTGGGGA TCCCCAGGGC
GCGATCGACC TGTCCACCCA GCGGGCCACC GAGGTGGCCG TGCTGCTGCA GGAGGTCGGG
GTGCCGGGCG AGAACATCAC CTCGGTGGTC GGCCTGGGCG ACTCCTCGCC GCTGGTGCAG
CCGGCCAGTG ATCCGGAGAA CCGCTCCGTG GTGGTCACCT TCACCTCCAC CGGCTGA
 
Protein sequence
MSRRRTPPTL PVRLPILAAA VALLTLTACS SGGSSGSGES SAAPTSAAPV TVAGSVVSTA 
GSSNEAQIVV PEVVAAQWAA LGSGNGVEWV AVAGDGTTST TPVAVADADA TSAFTAQLNA
LQAASPGRDA LAGLDAVASP AGSPVWVFSP LLDTQGALDM NLLAFDQSPP DVVSAATASG
ALPDLTGREV NFVVTPVAGQ QNALSDVQVG YQHAIWEGIA TAAGASTVTF YDGTGTGAGT
GTIPAVATPD PTDKISSEGS GPTRTCTLPT PALFLPNQAA LIDKAATLTA LSECVGTVDP
STKISVEGRT AAVPGGDPQG AIDLSTQRAT EVAVLLQEVG VPGENITSVV GLGDSSPLVQ
PASDPENRSV VVTFTSTG