Gene Namu_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0024 
Symbol 
ID8445603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp27216 
End bp28115 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID645039175 
ProductAuxin Efflux Carrier 
Protein accessionYP_003199451 
Protein GI258650295 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGA CCCTGCTCAA GGTCCTGCCG GTCATGCTCG GCTTCGTCGG GGGCTTCCTG 
CTGCGCCGAT TCCGGGTCGC CGAGCCGCGC GACGGTGACT TCCTGTTCCG GCTGGTGTTC
TACGTCTGCG TGCCGGCGCT GATGTTCGCC TCGCTGTCCA CGGTGCAGAT CACCGCCGCG
CTGGCCGTGT TCCCGCTGTC GTCGGCCCTG TTCACGCTGG TCGGGTTCGT GCTGGCCCTG
CTGACCGCGC GCCGGCTGCA CTGGGACCCG ACCCGGTCGG CGGTGCTGAT GTGCGGCTGC
ATGATCGCCA ACAGCGGCTT CGAACTGCCG TTCATCCAGG CCCTCTACGG CGCCGAAGGG
GTCGTCCGGA TCGCCGCCTT CGACGCGATG AATACGGCCC TGACCTTCAG CTTCGCCTAC
CTGGTGGCCG TGCGCGGCAA CCCGAACCGG CGCCGCGGCG GCGGGGCCAT GATCGGCCGG
TTGGCCCGCA GCCCGGCCCT GTGGGCGATC GCGCTGGGCC TGGCGGTCAA CCTGATCGCG
GTGCCGGTGC CCGCGCCGAT CCACGACTCG CTGGCGGTGT TCGGGGCGGC GACCGGGTTC
ATCATCCCGT TGGCCGTCGG CATCCTGTTC CAGCCCTCGG GCGGTCAGGT GGGCAAGGCG
GCGGTGATGG TCGGCGTCCG GCTGGCCGCC GGCCTGCTGG TCGCGGTCGG CCTGGTCCTG
GCCTTCGACC TGCAGGGGCT GGACCGCACG ATCATGCTGC TGCTCGGGAT CGCCCCGATC
GGGTTCTCGA CCGTCACCTT CGCCTCCCTG GAAAAGCTCG GCGAGAAGCT CGCGGTCACC
GCCTTGTCGT TGTCCCTGTC GCTGAGCCTG GTGCTGTCGA TGGTCGTGAC GGTGATCTGA
 
Protein sequence
MGETLLKVLP VMLGFVGGFL LRRFRVAEPR DGDFLFRLVF YVCVPALMFA SLSTVQITAA 
LAVFPLSSAL FTLVGFVLAL LTARRLHWDP TRSAVLMCGC MIANSGFELP FIQALYGAEG
VVRIAAFDAM NTALTFSFAY LVAVRGNPNR RRGGGAMIGR LARSPALWAI ALGLAVNLIA
VPVPAPIHDS LAVFGAATGF IIPLAVGILF QPSGGQVGKA AVMVGVRLAA GLLVAVGLVL
AFDLQGLDRT IMLLLGIAPI GFSTVTFASL EKLGEKLAVT ALSLSLSLSL VLSMVVTVI