Gene Namu_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0007 
Symbol 
ID8445584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp7832 
End bp9844 
Gene Length2013 bp 
Protein Length670 aa 
Translation table11 
GC content66% 
IMG OID645039156 
ProductDNA gyrase, B subunit 
Protein accessionYP_003199434 
Protein GI258650278 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGA AGAAGAACGA ATACGGTGCG TCTTCGATCA CCGTCCTGGA GGGTCTGGAA 
GCGGTCCGTA AGCGGCCCGG CATGTACATC GGGTCCACCG GCGAGCGGGG TCTGCACCAC
CTGGTCCAAG AGGTCGTCGA CAACTCGGTC GACGAGGCCA TGGCCGGGTA CGCCGACCGG
GTCGAGGTGA TCCTGCGGGC CGACGGCGGC GTCACCGTCA TCGACAACGG TCGGGGCATC
CCGGTGGAGA TGCACCCCAA GGAGAAGAAG CCGACCGTCG AGGTCGTGCT CACGGTGCTG
CACGCGGGCG GCAAGTTCGA CTCCGACTCC TACGCGGTCT CCGGCGGCCT GCACGGCGTG
GGTGTCTCGG TGGTCAACGC CCTGTCCACC CGGCTCGACG TGGAGATCCA CCGAGACGGC
CACGCCTACC GGCAGTCCTA CCGGTACGCC AAGCCCGGAC CGCTGGAGAC GATCGGGCCG
AGCTCGCGGA CCGGGTCGTC GGTCACCTTC TGGCCCGACG GGGAGATCTT CGAGACCGTC
GAATTCAAGC TGGAGACCAT CTCCCGCCGG TTGCAGGAGA TGGCGTTCCT GAACAAGGGC
CTGACCATCA CCCTGCGCGA CGAGCGCCGG ACCGACGTCG AGCTGGAGGA GATCGCCGAG
AGCGGTGCGA ATGCCGTTCC GGTCGAGGCG GAGCCGACGA CGCCGGCCAA AGCCTGGAAG
CCGCTGGAGC GGACCTTCCA CTACCCGGGC GGCCTGGTCG ACTACATCAA GCACCTCAAT
CACACCAAGG ACCCGATCCA CCCGTCGATC GTCGGATTCG AATCCAAGGG CGAGACGATG
GAGGTGGAGG TCGCGATGCA GTGGAACTCC TCCTACAACG AGTCCGTGCA CTCCTTTGCC
AACACCATCA ACACCCACGA GGGCGGCACC CACGAAGAGG GCTTCCGCTC GTCGCTGACC
TCGGTGGTGA ACAAGTACGC GACCGACAAG AAACTGCTGA AGGAAAAGGA CGACAAGCTT
TCCGGCGAGG ACGTCCGCGA GGGGCTGGCC GCGATCATTT CGATCCGGCT GCGCGAACCG
CAGTTCGAGG GACAGACCAA GGGCAAGCTG GGCAACACCG AGGCCAAGTC GTTCGTCCAG
AAGGCCTGCA ACGAATGGAT CGCCGACTGG TTCGAGCGCA ATCCCAGCGA GGCGAAAACC
ATCATCAGCA AGGCGGTTTC CTCGGCCCAG GCGCGGGCGG CCGCCCGCAA GGCGCGGGAC
CTGGTCCGCC GGAAGGGGGC CCTGGAAATC GGCGGCCTGC CGGGGAAGCT GGCCGACTGC
CGGTCCACCG ATCCGAGCAA GTCCGAGCTG TACATCGTCG AGGGCGACTC GGCCGGCGGT
TCGGCCAAGT CGGGCCGGGA CTCGATGTTC CAGGCGATCC TGCCGATCCG CGGCAAGATC
ATCAACGTGG AGAAGGCCCG GATCGACCGG GTGCTGCGCA ACACCGAGGT GCAGTCCCTG
ATCACCGCGT TGGGCACGGG CATCCATGAC GACTTCGACC TGGCCAAACT GCGCTATCAC
AAGATCGTGC TGATGGCCGA TGCCGACGTC GACGGCCAGC ACATCCGCAC CCTGCTGCTG
ACCCTGCTGT TCCGCTTCAT GCGGCCGCTG GTCGAGGCCG GCCACGTCTA CCTGGCCCAG
CCGCCCCTGT ACAAGATCAA GTGGAGCAAG GGTGCGCACG AGTTCGCCTA TTCCGACCGC
GAGCGTGACG GCCTGATCGC CGAGGGTGAG CGGGCCGGGC GCCGGATGAT CAAGGACGAG
GGTGTCCAGC GGTACAAGGG TCTGGGCGAG ATGAACGCCA AGGAGTTGTG GGAAACCACC
ATGGACCCGG CCAACCGGTT GCTGCTCCAG GTGACCCTGG AGGACGCGGC CACCGCGGAC
GAACTGTTCT CGGTGCTGAT GGGCGAGGAC GTCGAGGCGC GGCGGGCATT CATCACCCGA
AACGCCAAGG ACGTCCGGTT CCTGGATCTG TGA
 
Protein sequence
MTTKKNEYGA SSITVLEGLE AVRKRPGMYI GSTGERGLHH LVQEVVDNSV DEAMAGYADR 
VEVILRADGG VTVIDNGRGI PVEMHPKEKK PTVEVVLTVL HAGGKFDSDS YAVSGGLHGV
GVSVVNALST RLDVEIHRDG HAYRQSYRYA KPGPLETIGP SSRTGSSVTF WPDGEIFETV
EFKLETISRR LQEMAFLNKG LTITLRDERR TDVELEEIAE SGANAVPVEA EPTTPAKAWK
PLERTFHYPG GLVDYIKHLN HTKDPIHPSI VGFESKGETM EVEVAMQWNS SYNESVHSFA
NTINTHEGGT HEEGFRSSLT SVVNKYATDK KLLKEKDDKL SGEDVREGLA AIISIRLREP
QFEGQTKGKL GNTEAKSFVQ KACNEWIADW FERNPSEAKT IISKAVSSAQ ARAAARKARD
LVRRKGALEI GGLPGKLADC RSTDPSKSEL YIVEGDSAGG SAKSGRDSMF QAILPIRGKI
INVEKARIDR VLRNTEVQSL ITALGTGIHD DFDLAKLRYH KIVLMADADV DGQHIRTLLL
TLLFRFMRPL VEAGHVYLAQ PPLYKIKWSK GAHEFAYSDR ERDGLIAEGE RAGRRMIKDE
GVQRYKGLGE MNAKELWETT MDPANRLLLQ VTLEDAATAD ELFSVLMGED VEARRAFITR
NAKDVRFLDL