Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0004 |
Symbol | |
ID | 8445581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4728 |
End bp | 5870 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645039153 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_003199431 |
Protein GI | 258650275 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 89 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATGTGC GCCACCTGGC GCTGACCGAC TTCCGGTCCT GGCCCGCAGT CGACGTTCCC CTGCAACCCG GGGTCAACGT GCTGGTCGGT CGCAACGGGA CCGGCAAGAC GAACCTGATG GAGGCGTTGG GGTACCTGGC CACCCTCGGT TCGCACCGGG TGGCCACCGA CGCCCCGCTG GTCCGGTCCG GCTGCACCCG GTCGATCCTG CGGGCGGCGG TGGTCTCCGG CGATCGTGAG CTGCTGCTGG AGATGGAGAT CGCCCGGGAC CGGCGCAACA CCGCACGGAT CAACCGGGCG CCGCTCACCC GGCCGCGGGA CCTGCTCGGC GTGCTGCGCA CGGTGCTGTT CGCGCCGGAG GACCTGGCCC TGGTCCGGGG CGATCCGACC GAGCGGCGCC GGTTCCTGGA CGAGGTGCTG ATGATGCGGG CGCCCCGGCT GGCCGGGGTC AAGGCCGACT ACGACCGGGT TCTCAAACAG CGCAACGCCC TGCTCAAGAC CGCCGGCGCG GCCCGCCGGA CGGGCGATCT GTCCACCCTG GACGCGTGGG ACGAACACCT GGTCGCCGCC GGCGCCGAAT TGATCCACGC CCGGCTGGCC CTGGTCGCGC AGCTGCGGCC GCCGGTGACC GCGGCCTACG CCGACGTCGC CGGCGCCGAT CAGGTGGTGG ACCTGGTCTA CCGCTCGACG GTTCCGCTGG GTCCGGACCC GGCGTCGGCG GCCGGCACGA TCGCGGTGCC CGACCGGGCC GCGCTGGCCG AGGCGATGCT GGCCGAGCTC GGCCGGATGC GGAGCAAGGA ACTGGAACGC GGCATCTGCC TGGTCGGTCC GCACCGCGAC GACCTGGAGC TGCTGCTGGG CACCGACCCG GCCAAGGGAT ACGCCTCGCA CGGGGAGTCG TGGTCGTTCG CGTTGGCGCT GCGCCTGGCG TCGTTCTCGT TGCTGCGTTC GGACGGGGTC GATCCGGTGC TGATCCTGGA CGACGTGTTC GCCGAGCTCG ATGCCGGCCG CCGCGGCCGG CTGGCCGAGC TGGTCGCCGG CGCCGAGCAG GTGCTGATCA CCGCGGCGGT GGGCGCCGAC GTGCCCGGCG CGCTGGGCGG GGTGCGGCTG GCCATCGGCG ACGGGACCGT CGGGCCCGGC TGA
|
Protein sequence | MYVRHLALTD FRSWPAVDVP LQPGVNVLVG RNGTGKTNLM EALGYLATLG SHRVATDAPL VRSGCTRSIL RAAVVSGDRE LLLEMEIARD RRNTARINRA PLTRPRDLLG VLRTVLFAPE DLALVRGDPT ERRRFLDEVL MMRAPRLAGV KADYDRVLKQ RNALLKTAGA ARRTGDLSTL DAWDEHLVAA GAELIHARLA LVAQLRPPVT AAYADVAGAD QVVDLVYRST VPLGPDPASA AGTIAVPDRA ALAEAMLAEL GRMRSKELER GICLVGPHRD DLELLLGTDP AKGYASHGES WSFALALRLA SFSLLRSDGV DPVLILDDVF AELDAGRRGR LAELVAGAEQ VLITAAVGAD VPGALGGVRL AIGDGTVGPG
|
| |