Gene Namu_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0004 
Symbol 
ID8445581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4728 
End bp5870 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content74% 
IMG OID645039153 
ProductDNA replication and repair protein RecF 
Protein accessionYP_003199431 
Protein GI258650275 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones89 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTGC GCCACCTGGC GCTGACCGAC TTCCGGTCCT GGCCCGCAGT CGACGTTCCC 
CTGCAACCCG GGGTCAACGT GCTGGTCGGT CGCAACGGGA CCGGCAAGAC GAACCTGATG
GAGGCGTTGG GGTACCTGGC CACCCTCGGT TCGCACCGGG TGGCCACCGA CGCCCCGCTG
GTCCGGTCCG GCTGCACCCG GTCGATCCTG CGGGCGGCGG TGGTCTCCGG CGATCGTGAG
CTGCTGCTGG AGATGGAGAT CGCCCGGGAC CGGCGCAACA CCGCACGGAT CAACCGGGCG
CCGCTCACCC GGCCGCGGGA CCTGCTCGGC GTGCTGCGCA CGGTGCTGTT CGCGCCGGAG
GACCTGGCCC TGGTCCGGGG CGATCCGACC GAGCGGCGCC GGTTCCTGGA CGAGGTGCTG
ATGATGCGGG CGCCCCGGCT GGCCGGGGTC AAGGCCGACT ACGACCGGGT TCTCAAACAG
CGCAACGCCC TGCTCAAGAC CGCCGGCGCG GCCCGCCGGA CGGGCGATCT GTCCACCCTG
GACGCGTGGG ACGAACACCT GGTCGCCGCC GGCGCCGAAT TGATCCACGC CCGGCTGGCC
CTGGTCGCGC AGCTGCGGCC GCCGGTGACC GCGGCCTACG CCGACGTCGC CGGCGCCGAT
CAGGTGGTGG ACCTGGTCTA CCGCTCGACG GTTCCGCTGG GTCCGGACCC GGCGTCGGCG
GCCGGCACGA TCGCGGTGCC CGACCGGGCC GCGCTGGCCG AGGCGATGCT GGCCGAGCTC
GGCCGGATGC GGAGCAAGGA ACTGGAACGC GGCATCTGCC TGGTCGGTCC GCACCGCGAC
GACCTGGAGC TGCTGCTGGG CACCGACCCG GCCAAGGGAT ACGCCTCGCA CGGGGAGTCG
TGGTCGTTCG CGTTGGCGCT GCGCCTGGCG TCGTTCTCGT TGCTGCGTTC GGACGGGGTC
GATCCGGTGC TGATCCTGGA CGACGTGTTC GCCGAGCTCG ATGCCGGCCG CCGCGGCCGG
CTGGCCGAGC TGGTCGCCGG CGCCGAGCAG GTGCTGATCA CCGCGGCGGT GGGCGCCGAC
GTGCCCGGCG CGCTGGGCGG GGTGCGGCTG GCCATCGGCG ACGGGACCGT CGGGCCCGGC
TGA
 
Protein sequence
MYVRHLALTD FRSWPAVDVP LQPGVNVLVG RNGTGKTNLM EALGYLATLG SHRVATDAPL 
VRSGCTRSIL RAAVVSGDRE LLLEMEIARD RRNTARINRA PLTRPRDLLG VLRTVLFAPE
DLALVRGDPT ERRRFLDEVL MMRAPRLAGV KADYDRVLKQ RNALLKTAGA ARRTGDLSTL
DAWDEHLVAA GAELIHARLA LVAQLRPPVT AAYADVAGAD QVVDLVYRST VPLGPDPASA
AGTIAVPDRA ALAEAMLAEL GRMRSKELER GICLVGPHRD DLELLLGTDP AKGYASHGES
WSFALALRLA SFSLLRSDGV DPVLILDDVF AELDAGRRGR LAELVAGAEQ VLITAAVGAD
VPGALGGVRL AIGDGTVGPG